Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr707g00004 ATGAAAAAGTATGTGCAGTCTGTTTGGCCTCAGATCTTGGGTTTCCTATTACTCAGTGGTGTGTGTGTAGTTGATACAAAATTCAACATTGAAGCATGCAGCTCTTCAGACTCATGCCCCTCTCTTCTCTCCTATCTCTTGCCATGGGACTCCAAACTCTCCGAAATCGCCACTCGTTTCCACGTAAAAGCTTCTGACATCTTAGCCTCAAACTCTGTCTTCCCCATAACGCCATCAAGTGCAGATCAAATCCTTAGTGCCAAGTCATTAGTGAAAATACCTATTTGGTGTTTTTGTGTGGATGGCATCCGAAGGTCCATCTCAACCACTTACACTGTTCATGCAGCTGATACCCTTGCCTCCATATCAGACGGCTATGGTGGGTTGGTTAGTGCTCAACAAATCCAGAGTGTGAACAGCATCAATGCCACCAACCCCTTGACTTGTGGAGCCACCCTTGTTATTCCACTTCCATGCACGTGTTATAACAATGTCAATAATGGAGGAACCGCTATTTATATGTCTTATGTGGTGCAGAGAGGGGAGAGCTTGGGGAGCATTGCAGCCATGTTTGCCATTACTATTTATGACTTGGAAACTGTAAATGGGCTTGGCGACGCTGCAGTAGATCCTGGAGATATACTGTCTGTTCCCATTGCAGCATGTTCATCAGCAACCTTGAATTGGTACAATGAGAGTATGATAGTCCCAAATGGCTCATATACATTAACTGCCGGCAACTGCATCAAATGCACTTGTGAACCAAAGGATATTAAGATGCAATGTGTTCCTTCTGGACTGGATATCCCTTGCTACAATTTACGTTGCAAAGGATCCAAACTTATTATTGGGGATCAATATGTGAAGCGTTCAAAAACATCTTGCAATCTGACCCAGTGTGTTTACCGTGGCCATAGGGGTGGCAAAATTCTGAGTAGTTTGAAGAATTCTTCTTACCTTGAGTGCCCGGATAATCAAAGTCATAGTAGAGCATCATGTTCGCCTTCCTGGCCACCATATCCTGCAAGCCCATTTGTTATGTCTCCAAAGCCACCTCCGTCCTTGCCACTGCCAGTTTCTAAGGCTGCTCTGAAGACTCGTGCCTCTAGTGGAAGCCTTGGCCAATTTTTAATCAATGAACTGATATTATTCTTGTTAAAATTCATCCTTTATTTTCTGATTTGA 1185 0.438 MKKYVQSVWPQILGFLLLSGVCVVDTKFNIEACSSSDSCPSLLSYLLPWDSKLSEIATRFHVKASDILASNSVFPITPSSADQILSAKSLVKIPIWCFCVDGIRRSISTTYTVHAADTLASISDGYGGLVSAQQIQSVNSINATNPLTCGATLVIPLPCTCYNNVNNGGTAIYMSYVVQRGESLGSIAAMFAITIYDLETVNGLGDAAVDPGDILSVPIAACSSATLNWYNESMIVPNGSYTLTAGNCIKCTCEPKDIKMQCVPSGLDIPCYNLRCKGSKLIIGDQYVKRSKTSCNLTQCVYRGHRGGKILSSLKNSSYLECPDNQSHSRASCSPSWPPYPASPFVMSPKPPPSLPLPVSKAALKTRASSGSLGQFLINELILFLLKFILYFLI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr707g00004 394 ProSiteProfiles LysM domain profile. 109 155 IPR018392 -
Mupr707g00004 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 15 326 - -
Mupr707g00004 394 Pfam LysM domain 176 218 IPR018392 -
Mupr707g00004 394 Pfam LysM domain 111 156 IPR018392 -
Mupr707g00004 394 SUPERFAMILY LysM domain 109 157 IPR036779 -
Mupr707g00004 394 CDD LysM 109 155 IPR018392 -
Mupr707g00004 394 Gene3D LysM domain 106 163 IPR036779 -
Mupr707g00004 394 SMART LysM_2 110 156 IPR018392 -
Mupr707g00004 394 SMART LysM_2 175 218 IPR018392 -
Mupr707g00004 394 SUPERFAMILY LysM domain 174 218 IPR036779 -
Mupr707g00004 394 CDD LysM 175 217 IPR018392 -
Mupr707g00004 394 ProSiteProfiles LysM domain profile. 174 217 IPR018392 -
Mupr707g00004 394 Gene3D LysM domain 164 228 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr707g00004 Mupr-Chr707 15353 18405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr707g00004 1 363 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 39.891 9.17e-82 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr707g00004 - - gmx:100819382 555.058