Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr5212g00001 ATGGAAGAAGAAGGAGAAGGGGGGAGAGAGGAGAATAGACAAGTTGAACGTGCAGCAGCACAAGAACCGCAGCAGCAGCATCAGAAATGCCCACGCTGCGGTTCTACCAACACCAAGTTCTGCTATTTCAACAACTATAGCCTGTCACAGCCTCGTCACTTCTGCAAAACATGTAAAAGGTACTGGACACACGGTGGAACATTCAGGAACATACCCGTTGGTGGCGCTTCCCGTAAAGGGAAGCGTGCCAGAACAAATTCTTTGTCTTCCAATTCAGAACCAATGCCAAATTTGATGAAGCCTTCTCCGCCACCCTCTATGCTTCACTCAGCTAGCCCCTATTATCAACTTGGTCTTGTTAGTGGTGGAAGTAGCTATTTGTCTTCTCTTGCAGCCTTTCATTCGCTGAACCTATCACAGCCTTTCAATCCCTCTCTAAATGTTGCCGGTGGTGTTACTGTTACGGCTTCTTCTTCTTCTTTTTCTTCTAATTCGCCTCTTCTGTCTGGCTTCAACGCTGCTTCTCTTCCACCGCAATTCCATCACGTGGGAAACAGAGATAATAGGGTGGAATCTGTGTATCCTGCAGGACAAGGTTTGGTTCTGTCAAGCGTGGCTAGTGGCAGTGCTGATTCTCACTCTGCTAATGCTACACACCATAGGGCTAGTTCTGATGCCGCTCTGTGGAGTGCTACTATCCACGCCACTTCCATCACTGGTAACTCTGATCAGAACAATGTCAAAGCTGGCTCTTCTTCTTTCATCCCAGATCATTGGCTTCAACGCCCTGGGTTTGGCCCTCCTCAATAA 810 0.4802 MEEEGEGGREENRQVERAAAQEPQQQHQKCPRCGSTNTKFCYFNNYSLSQPRHFCKTCKRYWTHGGTFRNIPVGGASRKGKRARTNSLSSNSEPMPNLMKPSPPPSMLHSASPYYQLGLVSGGSSYLSSLAAFHSLNLSQPFNPSLNVAGGVTVTASSSSFSSNSPLLSGFNAASLPPQFHHVGNRDNRVESVYPAGQGLVLSSVASGSADSHSANATHHRASSDAALWSATIHATSITGNSDQNNVKAGSSSFIPDHWLQRPGFGPPQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr5212g00001 269 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 192 IPR045174 GO:0003700|GO:0006355
Mupr5212g00001 269 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Mupr5212g00001 269 MobiDBLite consensus disorder prediction 72 105 - -
Mupr5212g00001 269 MobiDBLite consensus disorder prediction 1 32 - -
Mupr5212g00001 269 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Mupr5212g00001 269 MobiDBLite consensus disorder prediction 18 32 - -
Mupr5212g00001 269 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Mupr5212g00001 269 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr5212g00001 Mupr-Chr5212 6513 7322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr5212g00001 23 114 C2C2-Dof Transcription Factor Family AT3G45610 53.261 7.38e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr5212g00001 zf-Dof 3.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr5212g00001 - - gmx:100814555 280.411