Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr442g00002 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCAAGCCATCCTCAAGCAAATGGCTGTGACAACACTCAGCTTCTTCCACCTTTGCCCCCACAGCAACCTCACGTGGGTTCAATCAGGCCAGGCTCCATGGCAGATCGAGCTAGGCTTGCAAAGATGGCACCTCCTGAACCAGCTCTCAAGTGTCCACGTTGTGATTCCACCAACACCAAATTTTGCTACTTCAACAACTATAGCCTCTCTCAGCCACGCCACTTCTGCAAGACTTGTAGGCGTTATTGGACAAAAGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGTTGCCGCAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAATCTCCAGCATCATCCGAGAAACAAACACTTTCAGGTTCCTCAACTGCACTCCCCTCAGCTGGAACCACTCACGAGCTAATTGGCCAGCTTCCACAGCCACCAAACCTTCCCTTCATGGCATCCCTTCAGAACCTTAACCGTTATACTGTTGGAAACATGGGCCTCGGGTTGCGTGAGATTCACGGACAGAACGATCACATGGGATTTCAGATTGCTAATTCAGGTGCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAGGTTCCTTTCTTAAATGGTTTTGAATCAACTTCAGCTGCCTCTTACCATTTTCAAAACGAGACTATTGAACCACCTTCTGGTTTGGTTGGAGACATAGCAACGAATTCTAGGGTTTCTCAGATACCACCAGTTAAAATGGAAGAAAGTGGAGCTTTAAATTTGTCAAGATCACCACTGAGTGTCACAGAAAATAACCAATACTATTCGTGGACTGATATGTCAGGTCTTGCCTCTTCTTCCGCTATCACTGTGACTACTTTAGCCAGACTTTCCCAGTGCCCAGAAGCTGGAGTTAAGTTCTACTCTCCCTCACTCTTTCATGAGTGTGAAATTCTTGGAAACTTGAGTGCGACAGTTATTTAA 1011 0.4718 MVFSSIPVFVDPPNWQQQPSHPQANGCDNTQLLPPLPPQQPHVGSIRPGSMADRARLAKMAPPEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKKNKRSRSKSPASSEKQTLSGSSTALPSAGTTHELIGQLPQPPNLPFMASLQNLNRYTVGNMGLGLREIHGQNDHMGFQIANSGAAGGGMDQWRLQQVPFLNGFESTSAASYHFQNETIEPPSGLVGDIATNSRVSQIPPVKMEESGALNLSRSPLSVTENNQYYSWTDMSGLASSSAITVTTLARLSQCPEAGVKFYSPSLFHECEILGNLSATVI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr442g00002 336 MobiDBLite consensus disorder prediction 111 148 - -
Mupr442g00002 336 MobiDBLite consensus disorder prediction 131 148 - -
Mupr442g00002 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 215 IPR045174 GO:0003700|GO:0006355
Mupr442g00002 336 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Mupr442g00002 336 MobiDBLite consensus disorder prediction 12 48 - -
Mupr442g00002 336 Pfam Dof domain, zinc finger 66 121 IPR003851 GO:0003677|GO:0006355
Mupr442g00002 336 MobiDBLite consensus disorder prediction 12 33 - -
Mupr442g00002 336 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr442g00002 Mupr-Chr442 19326 21510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr442g00002 37 286 C2C2-Dof Transcription Factor Family AT3G55370 44.170 8.84e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr442g00002 zf-Dof 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr442g00002 - - gmx:100816635 525.398