Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2854g00006 ATGCAGGATCCAACGGTGTTCCAAATGATGAAACCCTCGTTCCCCGAACAAGAACAACTGAAATGCCCGCGCTGCGAGTCCACCAACACCAAATTTTGCTACTTCAACAACTACAACCTGTCGCAGCCGCGTCATTTTTGCAAGAACTGCAGAAGGTATTGGACCAAAGGAGGTGCCTTGAGAAACATCCCCGTTGGGGGTGGAACCAGAAAGAACGCTAAACGATCCACCAACACCAAACGCACTGTTTCCTCTGCGCCCCTTCCGGAACCCGACCCGACCCGCATTTGCCCCGACCCGGTCGGTGCTGGGAGTTTCAGTTCCCTCCTTGCATCGAGTGGACTCTTGGAGGGTCTGAATTCAACTGGGTCGAATCTAAAAACTGTGCAAACGGAAGTGTTTGGGGAGAATGTTAGTTCGGGTCGGAATCCCGGGTTGGATATGCAGCATGGGAATGCTCAGAGTTTTCTGAGTATGCAAAACGATATGAATGTTGTTGTAGTGAGATTGTTTTCTATCTCATCACGTAGATGGAGGGTCGACAAGGTTCTAAGGAAATCTGTAGTGCATGTCAGAATTTAA 582 0.4948 MQDPTVFQMMKPSFPEQEQLKCPRCESTNTKFCYFNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNAKRSTNTKRTVSSAPLPEPDPTRICPDPVGAGSFSSLLASSGLLEGLNSTGSNLKTVQTEVFGENVSSGRNPGLDMQHGNAQSFLSMQNDMNVVVVRLFSISSRRWRVDKVLRKSVVHVRI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2854g00006 193 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Mupr2854g00006 193 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 112 IPR045174 GO:0003700|GO:0006355
Mupr2854g00006 193 MobiDBLite consensus disorder prediction 65 94 - -
Mupr2854g00006 193 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Mupr2854g00006 193 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2854g00006 Mupr-Chr2854 16920 18500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2854g00006 5 119 C2C2-Dof Transcription Factor Family AT1G51700 56.738 1.22e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr2854g00006 zf-Dof 5.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2854g00006 - - gmx:100798927 253.832