Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17646g00001 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACCTATGGAAGGTTCAAAGCCTCCTCCTCCCATGTTGGAGAGAAGGGCAAGGCCCCAGAAGGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACCAAATTCTGCTACTACAATAACTACAGCCTCTCTCAGCCAAGGTACTTTTGCAAGACATGTAGAAGGTATTGGACTGAGGGTGGTTCTCTGAGAAGTGTTCCGGTGGGTGGTGGCTCTAGAAAGAACAAGAGATCAAACCCATCATCAGCACCATCATCATCATCAGCACCAACAAAGAAGATTCCTGATCTGACAACACCAAATTTCCCTCAATCTGCTTCTCAGGACCCTAAGATCCACCAAGGTCAAGACCTTAACTTGGCATATCCACCAGCTGAGGACTATAGCAGTGTGTCCAAGTTCATTGAGGTTCCTTACAGCACTGAATTAGACAAGGGTGGTCTTCAAAACCCCACTTCCTCATCCACATCATCTTCTCAGTTGTCTGCCATGGAGCTTCTCAAGACTGGGATTGCTTCCTCCAGGGGCTTAAACTCCTTCGTGCCAATGTATAACTCAACTGGCTTTGCTTTCCAAGACTTTAAGCCACCACCTGGCCTTAACTTCAGTCTGGAGGGCTTTGAAAATGGTTATGGGTCTCTTCAGGGAATTCAAGAGAGTCCTACTGGTGCAAGGATCTTGTTTCCTGTGGAGGATTTAAAGCAGCAGGTTCCAACCACCAATGAGTTTGATCAACAGAATAGAAGTCAAGGGGATTCAGCTGGGTATTGGAATGGCATGTTAGGTGGAGGATCATGGTAG 846 0.4716 MDTAQWAQGIGVVKPMEGSKPPPPMLERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRSVPVGGGSRKNKRSNPSSAPSSSSAPTKKIPDLTTPNFPQSASQDPKIHQGQDLNLAYPPAEDYSSVSKFIEVPYSTELDKGGLQNPTSSSTSSSQLSAMELLKTGIASSRGLNSFVPMYNSTGFAFQDFKPPPGLNFSLEGFENGYGSLQGIQESPTGARILFPVEDLKQQVPTTNEFDQQNRSQGDSAGYWNGMLGGGSW 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17646g00001 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 175 IPR045174 GO:0003700|GO:0006355
Mupr17646g00001 281 MobiDBLite consensus disorder prediction 79 127 - -
Mupr17646g00001 281 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
Mupr17646g00001 281 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Mupr17646g00001 281 MobiDBLite consensus disorder prediction 256 281 - -
Mupr17646g00001 281 MobiDBLite consensus disorder prediction 1 38 - -
Mupr17646g00001 281 MobiDBLite consensus disorder prediction 87 127 - -
Mupr17646g00001 281 Pfam Dof domain, zinc finger 35 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17646g00001 Mupr-Chr17646 5410 6768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17646g00001 25 281 C2C2-Dof Transcription Factor Family AT3G61850 41.844 2.18e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr17646g00001 zf-Dof 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17646g00001 - - gmx:778114 468.003