Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16213g00001 ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGCCAACTGGCAGCAACAGCAACCAAATCACCAGCAGCCAGGCAACAACACTGCTGCCAGCTCCCACCTAATTCTTCCACCACCGCCGCCATCGCAACAGCATGGACTTGGCGGTAACACTACCACCGGGTCCATCAGACCTGGCTCGATGGCAGATAAGGCCAGGATGGCCAACATACACATGCAGGAAGCTCAACAAAAGTGTCCAAGATGTGAATCCTCCAACACAAAGTTTTGCTATTACAACAACTACAGCCTCTCTCAGCCCCGCCACTTCTGCAAGGCCTGTAGAAGGTATTGGACACGTGGCGGAGCCTTGAGGAACGTCCCCGTTGGTGGTGGCTGCCGGAGGAACAAGAGGAGTAGAGGTACCTCTGGCAGCAACACCAGGTCGCCGGCGAACTCCGATCGGCAAACAGCGAGTGCCGGTTCTGCTTCCACAACCAGCGGCTCTTCTTCTGCTGACATGGTAGCCGGCCTCGGCGGCACCGGAGTGCCGCCGTCTCTCAGATTCATGACTCCATTGCATCAACTTGGTGATCACCACCTTGGTGGTGGGGGTGGAGGAGAAATAGGGTTAAACTATGGCTTGAACTATGGCGCAATTTCAGGTCCAATGGGAGGAATAGGAGACTTGAATTTCCATATAGGAAGCACTTTGAATGGTGGTGGTTCCATGTTGTCTGGTTTGGACCAATGGAGGGTGCCACAAACTCACCAATTTCCCTTCTTGTCTGGTTTGGATGCTTCATCATCACATGGGTTGTATCCATTTGAAGGTGGTAGTGGTACTGATGGCTATGGTGGCGCTCCCATTAAGGTTTCAACTTCTGGGGTGATGTCTCAGCTTGCTTCTGTGAAAATGGAAGAGAATCATCAGGGACTTGGTTTTCCTAGACAGTTCTTGGGAGTCAATAATAATCCTAATACAAGTGAGCAATATTGGAGTGGTGGTGGTGCCACTTCTGCTTGGACTGATCTTTCTGCTTTTAGCTCTTCTTCCACTACTAAAAATATGATTGTGATGTCTCATCTTGCGCAGCCAAACCTAGAGATAGCTTCACTGAACAAAGACGATAAAAATGATTTTGATGTTTCATCTTGCGCAGCCAAACCTAGCGAGAGATAG 1164 0.4974 MVYTSIPAYIDPANWQQQQPNHQQPGNNTAASSHLILPPPPPSQQHGLGGNTTTGSIRPGSMADKARMANIHMQEAQQKCPRCESSNTKFCYYNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRSRGTSGSNTRSPANSDRQTASAGSASTTSGSSSADMVAGLGGTGVPPSLRFMTPLHQLGDHHLGGGGGGEIGLNYGLNYGAISGPMGGIGDLNFHIGSTLNGGGSMLSGLDQWRVPQTHQFPFLSGLDASSSHGLYPFEGGSGTDGYGGAPIKVSTSGVMSQLASVKMEENHQGLGFPRQFLGVNNNPNTSEQYWSGGGATSAWTDLSAFSSSSTTKNMIVMSHLAQPNLEIASLNKDDKNDFDVSSCAAKPSER 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16213g00001 387 MobiDBLite consensus disorder prediction 16 60 - -
Mupr16213g00001 387 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Mupr16213g00001 387 MobiDBLite consensus disorder prediction 132 168 - -
Mupr16213g00001 387 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 161 IPR045174 GO:0003700|GO:0006355
Mupr16213g00001 387 MobiDBLite consensus disorder prediction 16 34 - -
Mupr16213g00001 387 MobiDBLite consensus disorder prediction 122 171 - -
Mupr16213g00001 387 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Mupr16213g00001 387 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16213g00001 Mupr-Chr16213 1530 5075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16213g00001 1 345 C2C2-Dof Transcription Factor Family AT2G37590 40.541 5.04e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr16213g00001 zf-Dof 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16213g00001 - - gmx:100796820 576.63