Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15728g00001 ATGGATCCTTCTAGTGGACAACCCCAGCAGATGTCTAGGAAGTCAGTGGAGAACATGTTAGATTGCTCAGAAGCACAGCAAGAGAAGAAGCCAAGGCCTAATCCAGAACAAGCTCTGAAATGTCCAAGATGTGATTCCACCAGCACAAAATTTTGCTACTACAATAATTACAGTCTTTCTCAGCCGAGATATTTTTGCAAGTCTTGCAGGAGATACTGGACAAAAGGAGGAACACTGAGGAATGTTCCAGTGGGAGGAGGGTGCCGGAAGAACAACAAGAGGTCATCAAAGAGGGTTCAGGATCAGACACTCACACCCAATCATAACCCACTCCCTCATTTGTCTTATGACTCCTATGACTCCAATGACTTCACCACTCTAGCATTAGCTAGTTTCCAAAAACAATCAAGTGGGCAATTGGGTTATTACAATGATCATGATCTTTCAATTTTGGGGAACCCCACAGCCACAGGGTCGTTTTGTGATTTTCTTGGCAATTCAGGCATGAATCCCTCCTCAGCAAGCCCTTCTTTTTTGGACGCAATTCGAAGTGGATTCCTTGAATCACAAAATCATCTTCAGAATTTGTATTGTGTGTATGGAAATGGGGACATGGGGGAGGTGGATAATGGCAATTGTGGTGTGGTTGGGGCTAGTGGAGAGATGATGCTCCCTTATGATCAAGTGATGAGCAATATTGCAGCCACTCAACCAGTGAGTGTAGCTAGCATGAAGCAAGAACTGTTTAGTAGTGGTAGAGAACAAAGTGAAAGGAGGGTGTTGGGGGGTTTCCCATGGCAACTCAATGGAGACACAAACATTGGTGAGCTTGATTCAGGAAGAGGAATAAATTGGAACAGTTTCACATCTGCTTGGCATGGGCTTCTCCATAGTCCCCTAATACTGCCCCGAGCTCTCCCAAGTCTGAACAGTTAG 936 0.4498 MDPSSGQPQQMSRKSVENMLDCSEAQQEKKPRPNPEQALKCPRCDSTSTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNNKRSSKRVQDQTLTPNHNPLPHLSYDSYDSNDFTTLALASFQKQSSGQLGYYNDHDLSILGNPTATGSFCDFLGNSGMNPSSASPSFLDAIRSGFLESQNHLQNLYCVYGNGDMGEVDNGNCGVVGASGEMMLPYDQVMSNIAATQPVSVASMKQELFSSGREQSERRVLGGFPWQLNGDTNIGELDSGRGINWNSFTSAWHGLLHSPLILPRALPSLNS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15728g00001 311 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Mupr15728g00001 311 MobiDBLite consensus disorder prediction 85 111 - -
Mupr15728g00001 311 MobiDBLite consensus disorder prediction 1 22 - -
Mupr15728g00001 311 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Mupr15728g00001 311 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Mupr15728g00001 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 175 IPR045174 GO:0003700|GO:0006355
Mupr15728g00001 311 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15728g00001 Mupr-Chr15728 9058 10988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15728g00001 23 145 C2C2-Dof Transcription Factor Family AT5G60200 54.074 4.03e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr15728g00001 zf-Dof 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15728g00001 - - gmx:778104 462.611