Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15608g00001 GATTTGAAGCGTGACTCAAGGCGCCACCCTCTCTTTGTCCGTTTGAAGGAGATCATTTTGGAGCAAAAAATGTTGGGTCACTGTGAGAAAATGGTAGTAGTCACCCCTCCAACAGCGTCTAACAAATGGACACAGGCTCAGATAGATGATCACAAGGCCTCCATGGGCAGAGTCATGGAAAAACCAAGCCAAGATCTTCTTCAGCAGCAGCAACAAGCCCTCAAGTGCCCTCGCTGCGACTCCTCAAACACCAAGTTCTGCTACTACAACAACTACAGCTTGTCGCAGCCTAGGCACTTCTGCAAAGCCTGCAAGCGATACTGGACAAGAGGTGGAACTCTCAGAAACGTTCCCGTCGGTGGCGGTTGCCGGAAAAACAAGCGCGTCAAGCGTCCAAACGGCGACGCTTCTGCTAATTCCCCTCCTTCTTCCTCCACTCCCAGCGCCAATTCAAACCCTCCTTCGCAGCAGCCCCACATCGACAACATCACTTCTACTTCCGCCGCAAACCATATCAACATCAACCCTTTGTTTTTCGGTAACGGTAACGGTTGTGATGTCATGAATGTTCCTTTCCCAAGGTTTAATCTTCAGTCTCAGCTGAATGCTCTTGGGTTAGGTTTTCCATCTGGGGCTAGTGATAACGGGTTTAGTTCTTCAAATGATAATAACTCGTTTCTTTCAGCTTATAATTCCATCTTTGGTTCTTCCTCTTCCACTTGTGCGCCCTCAACTCCTGTTATGGCTTCCTTGCTGAGTTCCACTTTGCTGCAACAAAAGTTTAGCAGTGGTGGGGTGAAGGGTGATCAAGGTGGCAACAGTTTCCAGGGCTTGGCGCCGCTGGAAGGGTTGCAATTGCAGATGGAAGGGAATAATAGCTCAAAAGAAGTGAAAGTTGAAGGACAAAACAGGTTGGAGTGGAATAATAATAATAATGGTGGTGGTGCTTGCCAAAACCAGATGGAGCATGTGGGCTTGTCTGATCCTAATTCGCTTTATTGGAACGCTGCAACGGGTTTCGGTGCTTGGAGTGATCAACCTAACATTGGTCCTTCTCCTTCAGTCACTTCTCTGATCTAG 1080 0.4815 DLKRDSRRHPLFVRLKEIILEQKMLGHCEKMVVVTPPTASNKWTQAQIDDHKASMGRVMEKPSQDLLQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPNGDASANSPPSSSTPSANSNPPSQQPHIDNITSTSAANHININPLFFGNGNGCDVMNVPFPRFNLQSQLNALGLGFPSGASDNGFSSSNDNNSFLSAYNSIFGSSSSTCAPSTPVMASLLSSTLLQQKFSSGGVKGDQGGNSFQGLAPLEGLQLQMEGNNSSKEVKVEGQNRLEWNNNNNGGGACQNQMEHVGLSDPNSLYWNAATGFGAWSDQPNIGPSPSVTSLI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15608g00001 359 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
Mupr15608g00001 359 MobiDBLite consensus disorder prediction 119 162 - -
Mupr15608g00001 359 Pfam Dof domain, zinc finger 72 128 IPR003851 GO:0003677|GO:0006355
Mupr15608g00001 359 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Mupr15608g00001 359 MobiDBLite consensus disorder prediction 136 162 - -
Mupr15608g00001 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 62 253 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15608g00001 Mupr-Chr15608 6586 7831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15608g00001 74 359 C2C2-Dof Transcription Factor Family AT1G28310 39.873 4.04e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr15608g00001 zf-Dof 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15608g00001 - - gmx:778101 466.463