Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr13286g00001 ATGTCAGAGGTTAAAGACCCAGCCATAAAGCTGTTTGGAAGGACAATTTCGCTTCCACGCGATGATTCTTCTGCACCTGCGCGTGCCACCTGTCCTTCATCATCCTCTTCTTCTCCGCGTGAGGTTACTTCTGCCACCCAACACCAAGCTGAGGAACCATCAAGGAAAGAACTTACCTCGTTACAAGATGATGATGCCTCACATCAAACCACGGAGGATTTGAAATCTCCCACAACATCTTCAGGCATGTTGGAGAATCCTAAGACTCCCTCAGCTGAAACCGAGACATCATTACCAAAAACCTCTATGAATGGAGATCAAAACGAAACAAGTGCTTCTGAAGACAAAACTCCAAAGAAGCCTGACAAGATACTTCCATGCCCGCGATGCAATAGCATGGATACCAAATTCTGCTACTACAACAATTACAACGTCAACCAGCCTCGTCATTTCTGCAAGAACTGCCAAAGATACTGGACTGCAGGAGGAACAATGAGGAATGTGCCGGTAGGAGCTGGTCGCCGAAAGAACAAGAACTCTTCGGCGACTGCATCACATTACCGGCACATAATGGTCCCTGAGGGGCTTCAAGGAGCTACACTCAATGCCCCCAATGGATTGCATAATGCTGTTTTGGGAAATGGAGCAGCTGTATTGACCTTTGGTCCTGAATCTCCCCTTTGTGATACCATGGCTTCTGTGTTGAACATTGCTGAGAGACCACAAAGTTGTGTTCCAAATGGATTTCATGCAACTGAGCCAAATACTTTTGATGATGGGGATGGTCACTCTACTGGAGTTTCTGTTACAACAACTTCAACTTCAAGCCATACTGGCTCACATGAATCAGTGGATAGAAGAGTTGAAGGTTTCACTCCTCAATTAACATACTTCCCAAGTTCCCCTTGGCCTTATCCTATGCCTCATCCTACATTTTGTCCACCAGGCTACCCTTTATCATTCTATACCACACCAGCATATTGGGGCTGTATGCCACCCTCTTGGAATAATATATCATGCATCTCACCCCAATCTTCTGTTAACAACTCTGCCTCTGCCCCTACTTTGGGGAAACACTCAAGGGATGGGAACATCATTGCCCCATCCAATTCAATGAAAGAAATGCATGATATAGAGCACAATGTCTTGATCCCCAAGACTCTTAGAATTGATGACCCTAGTGAAGCTGCAAAGAGTTGTTCCATGTGGTCAAAACTAGGGAACAAGAATGATAAGGCCAGCTCTGGAGGCCTTTTTAAAGCTTTTCCATCCAAGGGAAATAACATGAATGACATGGTTGAAGCATCACCAGTGTTGCAAGCCAACCCTGCAGCTTTATCCCGGATTCCTAGGACAGAAGTGTTACACTATGGCTTCTCTAGCTGCCATCTCGAACCTGTCACAGTGAAC 1410 0.4567 MSEVKDPAIKLFGRTISLPRDDSSAPARATCPSSSSSSPREVTSATQHQAEEPSRKELTSLQDDDASHQTTEDLKSPTTSSGMLENPKTPSAETETSLPKTSMNGDQNETSASEDKTPKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSATASHYRHIMVPEGLQGATLNAPNGLHNAVLGNGAAVLTFGPESPLCDTMASVLNIAERPQSCVPNGFHATEPNTFDDGDGHSTGVSVTTTSTSSHTGSHESVDRRVEGFTPQLTYFPSSPWPYPMPHPTFCPPGYPLSFYTTPAYWGCMPPSWNNISCISPQSSVNNSASAPTLGKHSRDGNIIAPSNSMKEMHDIEHNVLIPKTLRIDDPSEAAKSCSMWSKLGNKNDKASSGGLFKAFPSKGNNMNDMVEASPVLQANPAALSRIPRTEVLHYGFSSCHLEPVTVN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 258 279 - -
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 72 111 - -
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 254 285 - -
Mupr13286g00001 470 ProSiteProfiles Zinc finger Dof-type profile. 125 179 IPR003851 GO:0003677|GO:0006355
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 14 123 - -
Mupr13286g00001 470 ProSitePatterns Zinc finger Dof-type signature. 127 163 IPR003851 GO:0003677|GO:0006355
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 50 71 - -
Mupr13286g00001 470 PANTHER CYCLIC DOF FACTOR 2 1 448 IPR045174 GO:0003700|GO:0006355
Mupr13286g00001 470 MobiDBLite consensus disorder prediction 27 49 - -
Mupr13286g00001 470 Pfam Dof domain, zinc finger 122 179 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr13286g00001 Mupr-Chr13286 4499 7490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr13286g00001 4 448 C2C2-Dof Transcription Factor Family AT5G39660 39.024 7.26e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr13286g00001 zf-Dof 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr13286g00001 - - gmx:100813315 735.332