Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11954g00003 ATGAATTGGGAGAAGGCTGAAAAGCTAAAAACGGAAAAAGGAAAAAAGATAACGGAAATGTCGGAGGCCAAAGACCCGGCGATCAAGCTCTTCGGGAAGACGATCCCGCTGCCGGAGGTTCCCGCCGGATCCACCGGAGCTCCGGCTTCGTCTTCCGGCGATGTTGTCGATGACAGTGCTGAACAGAGCCACGCTTCTTCCACCAACTCTTCCAGGGAGTCGCATACACGAGAGAGAGATTTTGATAAGGACACATTGGGAGAAAAATCAACTGATAACAAGAAGGAAGATGGAGCCCCCACCCAATCAACAGAAGAGGTCAACAATCCAGATTCTACCTCTAGAACCTGTGAAGATTCTGTTGCCCTGTCCACTGAGAGGGAGGATACTATGAAAACATCTAAGACCGAAGAAGATCAGGGGGAGACAAGTAATTCACAGGATAAGAACCTCAAAAAACCAGACAAAATACTACCTTGTCCTCGCTGTAATAGCATGGACACCAAGTTCTGCTATTACAATAATTACAATGTCAACCAACCCCGCCACTTCTGCAAGAATTGTCAGAGATATTGGACTGCTGGAGGGACCATGAGGAATGTTCCTGTTGGTGCTGGTCGCAGGAAGAACAAAAATTCCGCTTCTCACTATCGCCAGATAACTGTTTCTGAAGCAGCCCTCCAGAACCCTCGAACAGACTTGCCAAATGGAGCATATCATCCTTCCTTGAAGTGCAATGGCACAGTCCTTACATTTGGATCCGATACGCCCTTGTGTGAATCAATGGCATCTGTTTTGAACCTTGCTGATAAGACAGTGCACAATTACACAAGAAATGGATTTCATAAACCTGAAGAACTAAGAATTCCTGTTCCACATGCCAGTGGAGAAAAAGGGGATGATCAATCCAATAAATCTTCTGTTACCTCCACAAAGTCAATGGAAGGTGCAAGTACCAATGAACATCAAGAACAAGCTATTCAAAATTGTCAAAGCTTCCCACCACAGGTTCCCTACTTTCCTGGGACCCCTTGGCCTATCCCATGGAATCCAGTGCAGTGGAGCTCTCCAGTACCACCACCTGCTTTTTGCCCACCAGGATTTACCATGCCATTCTATCCGGCAACAGCTTATTGGGGCTGTGCTATGTCAGGTGCGTGGAACATCCCATGGCTAGCGCAACCGCCATCACCAAATGCTGCAACCCCTAACTCTGGCCCCAACTCCCCAACCTTGGGTAAACATTCAAGGGAAGACAACATACTCAAACCAAATGAGTCAGGTGATGAGGATGAACACAGCAAAGAAAAGTGCCTGTGGTTTCCGAAAACTTTGAGGATTGATGACTCAGGACAAGCAGCAAAAAGCTCCATATGGACTACCCTGGGAATTAAAACTGACAAGGCTGACTCAGTTCCTGGTGGAGGACTCTTCAAAGCATTCCCTTCAAAGCACGATGAAAAAAATCATTCAATGCAAGCCTCACCTGTCTTGCAGGCCAATCCAGCAGCATTGTCGAGGTGCAGCAAACTGATATGGCAGTGTTCAACCGGTCCTGAGGGAAACACAAATTGTAAAGCCACATTGGTTCGCCAGCCTTGGACGGTTGATTCAGGGTCAACTCTTCTGGTTCTTCCATCTCTTGTTAAG 1650 0.4709 MNWEKAEKLKTEKGKKITEMSEAKDPAIKLFGKTIPLPEVPAGSTGAPASSSGDVVDDSAEQSHASSTNSSRESHTRERDFDKDTLGEKSTDNKKEDGAPTQSTEEVNNPDSTSRTCEDSVALSTEREDTMKTSKTEEDQGETSNSQDKNLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRQITVSEAALQNPRTDLPNGAYHPSLKCNGTVLTFGSDTPLCESMASVLNLADKTVHNYTRNGFHKPEELRIPVPHASGEKGDDQSNKSSVTSTKSMEGASTNEHQEQAIQNCQSFPPQVPYFPGTPWPIPWNPVQWSSPVPPPAFCPPGFTMPFYPATAYWGCAMSGAWNIPWLAQPPSPNAATPNSGPNSPTLGKHSREDNILKPNESGDEDEHSKEKCLWFPKTLRIDDSGQAAKSSIWTTLGIKTDKADSVPGGGLFKAFPSKHDEKNHSMQASPVLQANPAALSRCSKLIWQCSTGPEGNTNCKATLVRQPWTVDSGSTLLVLPSLVK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11954g00003 550 ProSiteProfiles Zinc finger Dof-type profile. 158 212 IPR003851 GO:0003677|GO:0006355
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 71 101 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 1 157 - -
Mupr11954g00003 550 ProSitePatterns Zinc finger Dof-type signature. 160 196 IPR003851 GO:0003677|GO:0006355
Mupr11954g00003 550 Pfam Dof domain, zinc finger 155 212 IPR003851 GO:0003677|GO:0006355
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 416 435 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 301 325 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 284 300 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 102 120 - -
Mupr11954g00003 550 PANTHER CYCLIC DOF FACTOR 2 20 508 IPR045174 GO:0003700|GO:0006355
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 284 325 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 45 70 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 121 156 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 1 23 - -
Mupr11954g00003 550 MobiDBLite consensus disorder prediction 397 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11954g00003 Mupr-Chr11954 14586 18977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11954g00003 25 511 C2C2-Dof Transcription Factor Family AT5G39660 45.261 6.32e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr11954g00003 zf-Dof 3.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11954g00003 - - gmx:100784308 857.055