Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11163g00004 ATGAAGGAGCTTCATTCAGTCATTTCTATTTTCAGAATGGCAAATCCAATGCACGTGCTGCACAGCACGTTGTTCCTCTCGTTAGTTTTCCACGGGTTAATGAACGCGAGTGGCAAATCCACCATCGAGCCATGTTCGAACTCAGACTCATGCAACGCGCTGCTAGGGTACACGCTCTACACGGAGCTCAAAGTATCAGAAGTAGCGTCCCTGTTTCAAATCGACCCCATCGCGCTTCTGACGGCCAATGCCATCGACATCTCGTACCCCGACGTGGAGCACCACATCCTCCCTTCCAGACTCTTCCTCAAAATCCCCATCTCTTGCTCCTGCGTCGACGGGATTCGCAAATCTGTTGCCACGCACTACAAGACGCGCCCTTCCGACACGCTCTCATCCATCGCCGACTCCGTCTACGGTGGCCTCGTCTCCTCCGACCAGCTCCGCGAGGCCAATTCCATCGACGACCCTTCCGTCCTCGATGTGGGACAGAACCTCGTCGTTCCTCTTCCCTGCACCTGCTTCAACGGTTCCGATAACTCTCTCCCCGCTATTTACCTCTCTTACGTGGTTCGCCCCGTTGATACCTTGGCCGCCATTGCTGCCACTTATTTCACCACTCTCACTGATTTGATGAACGTTAATGCCATGGGAAGCACTGCTATTAACGACGGTGATATCCTCGCTGTTCCAATACCCGCTTGTGCTTCCAATTTTCCAAAATCCGCCTCTGATTTTGGCTTGCTTGTACCTAATGGAAGCTATGCCATTACTGCGGGTCACTGTGTGCAGTGTAGCTGTGGACCTCGGAACCTTAATTTGTACTGTATGCCGGCTTCTCTGGCTGTTTCTTGCTCCAGCATGCAGTGTAGAAATAGCAACCTTATGCTTGGGAATGTTACCGTGCAGCAGACTGGTGGTGGTTGCAACGTTACTTCTTGTAGTTATGATGGCATTGTTAATGGCACCATAGTAACAACGTTGTCCCCGTCTCTTCAGCCTCGATGTCCAGGATCGCAGGAATTCCCTCCTCTTATAGCCCCACCTACATCTGTTGCAAGGGACTCAGTGTTTGCACCAGCACCATCACCACAGTTCGATGGAGCTGGTCCAGCTTCACCAATATCCTCACTGGTGCCTGCAACAGGGCTTCCGGGATTCTCTCCTGCAAATGGCCCTATTAGCGGGATTTCTTCTGGTGCTTCCGCTGCATGCTCCTTGGCCAAACCATTACCCGCTTTGACGACCGCACTGGTGTTATTGCTTGTCAAGTTGATCATACCTGTGGCATTGTAA 1296 0.5185 MKELHSVISIFRMANPMHVLHSTLFLSLVFHGLMNASGKSTIEPCSNSDSCNALLGYTLYTELKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSRLFLKIPISCSCVDGIRKSVATHYKTRPSDTLSSIADSVYGGLVSSDQLREANSIDDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTLAAIAATYFTTLTDLMNVNAMGSTAINDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCRNSNLMLGNVTVQQTGGGCNVTSCSYDGIVNGTIVTTLSPSLQPRCPGSQEFPPLIAPPTSVARDSVFAPAPSPQFDGAGPASPISSLVPATGLPGFSPANGPISGISSGASAACSLAKPLPALTTALVLLLVKLIIPVAL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11163g00004 431 ProSiteProfiles LysM domain profile. 187 230 IPR018392 -
Mupr11163g00004 431 Gene3D LysM domain 176 242 IPR036779 -
Mupr11163g00004 431 SUPERFAMILY LysM domain 187 232 IPR036779 -
Mupr11163g00004 431 CDD LysM 188 230 IPR018392 -
Mupr11163g00004 431 ProSiteProfiles LysM domain profile. 121 168 IPR018392 -
Mupr11163g00004 431 Gene3D LysM domain 115 175 IPR036779 -
Mupr11163g00004 431 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 17 340 - -
Mupr11163g00004 431 Pfam LysM domain 189 231 IPR018392 -
Mupr11163g00004 431 Pfam LysM domain 123 169 IPR018392 -
Mupr11163g00004 431 CDD LysM 121 168 IPR018392 -
Mupr11163g00004 431 SMART LysM_2 122 169 IPR018392 -
Mupr11163g00004 431 SMART LysM_2 188 231 IPR018392 -
Mupr11163g00004 431 SUPERFAMILY LysM domain 121 170 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11163g00004 Mupr-Chr11163 34548 36657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11163g00004 24 406 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.619 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11163g00004 - - gmx:100777292 691.419