Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr10637g00001 ATGCCAAATCAAGATCCCATTTTGCACTGCACCTTCCTCTTGTTACTCTTGCATGTTCTACTCAATGCAGCTCCTGTGAGTTGCAAATCCACCATTGAGCCATGCTCCAACAACGACTCATGCAATGCTCTTCTTGGCTACACCCTTTACACTGACCTCAAGGTCTCTGAGGTTGCTTCTCTTTTCCAAATAGACCCCATTGCACTTCTCACTGCCAATGCCATTGACATCTCTTACCCTGATGTAGAGCACCACATTCTCCCTTCCAAGCTCTTCCTCAAGGTCCCTATCACATGTTCCTGTGTTGATGGGATTAGAAAATCAGTGTCCACCCATTACAGGACTCGCATTTCTGATACTATCTCTTCCATTGCTGATTCAGTGTATGGGGGTTTGGTGTCCCCTGATCAGCTTAGAGAGGCTAATTCTATTGATGACCCTTCTGTGCTTGATGTGGGTCAGAACCTTGTGGTGCCACTTCCATGCACTTGCTTCAATGGGAGTGATAACTCTTTGCCTTCAATTTACCTCTCCTATGTGGTTCAGCCAATTGATACTTTGGCTGAAATTGCAGCTAGATATTTCACCACTCTTACTGATTTGATGAATGTCAATGACATGGGGACTACAGCTATCTCTGGTGGTGATATTCTTGCTGTTCCAATACCTGCTTGTGCATCAAATTTTCCAGAATATGCTTCTGATTTTGGCTTGCTTGTCCCTAATGGAAGCTATGTCATTACAGCTAGTCACTGTGTGCAGTGTAGCTGTGGACCACGAAATTTAAATTTATACTGTATGCCATCTTCACTAGCTGTCTCTTGCTCCAGCATGCAATGCAAAAGCAACAATCTTATGCTTGGGAATGTCACTGTGCAACGTAGTAGTTCTGGTTGCAATGTTACATCATGCAATTATGATGGTTTTGTTAATGGCACCATAATAACAACGTTGTCCCCATCACTTCAACCTCGTTGTCCAGGAGTGCAGCAATTCCCTCCACTTATTGCACCACCTACATTTGTTACAAGAGAATCGGTATTTGCATTCGCCCCATCACCACCACCATCATCGTTACCATCACCATCGCCATCGCCTCCATCAGAAGGAACTGGTCTAACAGCACCCACATCATCGGTTGTGCCTGCTATAGAATCATTTCCACGATTCTCACCTGCAAATGGTCCTGTTAGTAGGATTGCTTCTGGTGCTTCTGCTTCTTCTGCTGCTCCCTCTTTGGCGAATCCGTTGCCTGTATCGACATCTGCATTTATGTTACTGCTTGTAAAGTTGATGATGATCCCTTTG 1308 0.4465 MPNQDPILHCTFLLLLLHVLLNAAPVSCKSTIEPCSNNDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSKLFLKVPITCSCVDGIRKSVSTHYRTRISDTISSIADSVYGGLVSPDQLREANSIDDPSVLDVGQNLVVPLPCTCFNGSDNSLPSIYLSYVVQPIDTLAEIAARYFTTLTDLMNVNDMGTTAISGGDILAVPIPACASNFPEYASDFGLLVPNGSYVITASHCVQCSCGPRNLNLYCMPSSLAVSCSSMQCKSNNLMLGNVTVQRSSSGCNVTSCNYDGFVNGTIITTLSPSLQPRCPGVQQFPPLIAPPTFVTRESVFAFAPSPPPSSLPSPSPSPPSEGTGLTAPTSSVVPAIESFPRFSPANGPVSRIASGASASSAAPSLANPLPVSTSAFMLLLVKLMMIPL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr10637g00001 436 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Mupr10637g00001 436 CDD LysM 178 220 IPR018392 -
Mupr10637g00001 436 Pfam LysM domain 116 159 IPR018392 -
Mupr10637g00001 436 Pfam LysM domain 179 221 IPR018392 -
Mupr10637g00001 436 Gene3D LysM domain 109 167 IPR036779 -
Mupr10637g00001 436 Gene3D LysM domain 168 229 IPR036779 -
Mupr10637g00001 436 MobiDBLite consensus disorder prediction 353 369 - -
Mupr10637g00001 436 CDD LysM 119 158 IPR018392 -
Mupr10637g00001 436 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 13 328 - -
Mupr10637g00001 436 MobiDBLite consensus disorder prediction 352 377 - -
Mupr10637g00001 436 SMART LysM_2 119 159 IPR018392 -
Mupr10637g00001 436 SMART LysM_2 178 221 IPR018392 -
Mupr10637g00001 436 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Mupr10637g00001 436 SUPERFAMILY LysM domain 177 222 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr10637g00001 Mupr-Chr10637 3630 6536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr10637g00001 4 410 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 65.356 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr10637g00001 - - pvu:PHAVU_008G163700g 686.797