Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3848 ATGATGAGAAGTGAGAGACAAGAGTTAGTGATAGCAGAATTGAAGAGACAACTATGGTTAGCAGTTCCTCTGTCCTCTGTTGGAATCTTACAATACATTCTACAAACAATTTCTATTATGTTTGTTGGACATCTTGGTACTCTCCCACTTTCTGGTGCTTCCATGGCCACTTCCTTTGCATCTGTTACTGGCTTCACATTACTGATGGGAATTACTAGTGCACTGGACACATTTTGTGGTCAATCAAATGGAGCAGAACAGTACCATATGCTTGGAATACACATGCAAAGAGCCATGATTGTGGTTTCAATTGTGAGTGTATTCCTTGCCATCATATGGGCAAATACAAAACAAATTTTAGTTGTTATGCATCAGGACAAAGCCATATCCAAGGAAGCTGGTTCATACGCGTTGTTTCTGATACCGAGTTTGTTCGCATATGGTCCTCTCCAGTGCATTCTCAAGTTCTTGCAAACACAAAACATTGTCCTCCCAATGGTGATAACTTCTGGGATTGCAGCTTTGCTTCATACCCTTTTGTGTTGGCTTTTGGTTTTTGAATTTAAGCTTGGAAGTAAAGGGGCAGCTATATCCAATTCTATATGTTATTGGGTCAATGTGTTGTTGATTTCACTCTATGTAAAATTTTCTTCTACTTGTAAACAAACATGGACAGGGTTTTCAAAGAGAGCTCTGCAGGATCTCTTTGTTTTCCTTAGACTTGCTATACCTTCAGCTCTCATGGTCTGCTTGAAAGTGTGGACTTTTGAATTGATGGTTCTCATGTCTGGTCTTCTTCCTAATCCAGTAATAGAAACTTCAGTGCTTTCAATATGCCTTAATACATTTGGTCTAGCTTGGATGATCCCTTTTGGGTGCAGTTGTGCTGTCAGCATACGGGTGTCGAATGAACTGGGAGGTGGAAATCCAAATGGTGCAAGTCTAGCAGTTCGTGTGGCGTTATCGATATCCTTCATTGCAGCCTTATTTATGGTTTTAAGTATGATTCTAGCCAGGAAAGTGTGGGGGCATCTTTACAGTGATGACAAACAAGTCATCAGATATGTGTCAGCTATGATGCCAATTTTGGCTATCTCCAGTTTCTTAGATGCCATCCAAAGTACACTTTCAGGTGTTCTTGCAGGATGCGGGTGGCAGAAGATCGGTGCCTATGTGAATCTTGGTTCATTTTATGTTGTAGGTGTACCATGTGCTGTTGTATTAGCCTTTTTTGTACACATGCATGCCATGGGACTGTGGTTAGGGATCATCTCTGCATTTATTGTGCAAACTTCACTTTACATAATTTTTACCATTCGTTCTAACTGGGAGGAAGAAGCAAAGAAAGCTCAAAGCAGAGTAGAGCGCTCAACCACCACCCCAAATACTACTACCCTCAGAGACAGCATTTCACCATCTCAAAAACTTGAACAAATTCCCTAA 1443 0.4082 MMRSERQELVIAELKRQLWLAVPLSSVGILQYILQTISIMFVGHLGTLPLSGASMATSFASVTGFTLLMGITSALDTFCGQSNGAEQYHMLGIHMQRAMIVVSIVSVFLAIIWANTKQILVVMHQDKAISKEAGSYALFLIPSLFAYGPLQCILKFLQTQNIVLPMVITSGIAALLHTLLCWLLVFEFKLGSKGAAISNSICYWVNVLLISLYVKFSSTCKQTWTGFSKRALQDLFVFLRLAIPSALMVCLKVWTFELMVLMSGLLPNPVIETSVLSICLNTFGLAWMIPFGCSCAVSIRVSNELGGGNPNGASLAVRVALSISFIAALFMVLSMILARKVWGHLYSDDKQVIRYVSAMMPILAISSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYVVGVPCAVVLAFFVHMHAMGLWLGIISAFIVQTSLYIIFTIRSNWEEEAKKAQSRVERSTTTPNTTTLRDSISPSQKLEQIP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3848 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 455 - -
Mtr8g3848 480 MobiDBLite consensus disorder prediction 454 480 - -
Mtr8g3848 480 CDD MATE_eukaryotic 13 449 IPR045069 GO:0042910|GO:1990961
Mtr8g3848 480 Pfam MatE 23 183 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g3848 480 Pfam MatE 244 406 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g3848 480 TIGRFAM matE: MATE efflux family protein 28 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr8g3848 480 Coils Coil 440 460 - -
Mtr8g3848 480 PANTHER PROTEIN DETOXIFICATION 2 455 - -
Mtr8g3848 480 MobiDBLite consensus disorder prediction 450 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3848 Mtr-Chr8 49159205 49162061 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3848 8 49159205 49162061 Mtr6g2115 6 37850171 37855176 ECH
Mtr8g3848 8 49159205 49162061 Mtr8g3848 8 49159205 49162061 ECH
Mtr8g3848 8 49159205 49162061 Mtr6g2117 6 37864800 37876350 PCT
Mtr6g2113 6 37785433 37795831 Mtr8g3848 8 49159205 49162061 PCT