Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3835 ATGATGGATCCATCATCACCCTCCATCTCCATATCACAAAAACAGCACCCTCTCCCTTTCCCTGAATCGGTGTCAGCACTGCCTTCCTCTCCTCGTCATCATTATCATAATGACACATCTGATCTCCTCCTCATCCCTCACGTGCCTGGCTCCAAACTCCGCCTCATGTGCAGCTACGGCGGCCACATCATGCCACGTGACAACTCCCTCTACTACGTCGGTGGCGACACTCGTATCGTCGCCGTTGACCGTCACTCTTCCTTATCACACCTCTTTTCTCACCTCTCTCGCACTCTCCTTCATGGAAGAAGACCTTTCACTCTCAAGTACCATCTTCCCAATGAAGACCTTGACAACCTCATCACTGTTTCCACTGATGAAGACCTCCAGAATATGATAGATGAGTATGATCGTTTGTCTTCAAACCCTTCTCCTTCACCTTCTCGACTCAGATTGTTCCTCTTCTTCTCAAAACCAGATACTGCTGTTTCCATGGGAAATGGTCACTTTTATAATCATGCATGGTTTGTGGAAGCTCTCAACAACTCAGGGATTCTGTCTCGTGTTGTTTCAGATTCTGCAGCTGCTGTTGATAACTGCCTCCTCAACCTCGATGATTATGATATTAGTGCTTCAAGTAATGACGAAAATACTAATAATAATGTTATCAAGGAGCATTTGATTGATGTTGATTATTCAGTGCCTGTGGAGGAGGAGGAGGAGAAGAACATGTTTAATTATTCAATTGCTAATCTTCGAGTTCGTGTTGATCATGACGATGATGGTAGCGGGGTGAAGCAAGAGCAGAGGCTTAGGATGGAACAACAGCATGAAAACAACTTTGATAATGTGAAGCAGCAAAACGATCCTTTTCTTGAATCTTCTTATTGTCACGATGGCCGTGCTGGTTATGATTTCATCAATAGGGTTGTGTCCGATGATCGAAAGCCTCCTTTGCCGTCGCTCATTGTTCAACCAAGGACCACCGGAGCTAGCCTTGGTTTGCCTTCTCCAGATTCACTAGCAAGTGATAGCAGTGTTGCATCTGCATGTGTGGACAACAAAGATACAACTTTGTCAAATAATATCAAAAGTGAAGTATTTGATCAAAATCAACAAGGGGAACAAGCAAAGGATCTTGATTACACCCCACCCCAACAACAATTGAATCAAAACCAGCAACCTCAGACATATCAACAACATCAATTTGTCTATATTCATCGTCCTATAGGTACAGGTCAAGTTCCATTGTCATCCTACTACCCAGTTTATGCCCCACCATCACAATCACACCAACTTCATCAGTATCCTGTTTATGTAATGCCAATTGGACATGGATCGACACAACCATACAACATGGCTTTACAATCCAATTTATCTGACACAAATGTCGTAGCTTCAACTATGCCACTAATACCACAAAGTGTTGTACCTGAGGTGAATCCAAGTGTTTATAAAACTCCTATGGCATCAAATCCATCTTTTATTCAAGTTCTTTCTAATCAATATCAGCAGCAATACGTGAGTTTATCTCAAAATATTCATCATCCACCACAGAAGACTATTTATGGTTATGAATATGGTGGAGGTGGAGCTACGCAAGAACAAGTATACTACACACAACAGCAGCCCGCAAATGCAAATGCACCTCCTCAGTACCAATCCATGACCCCAGCACCTGCTGTAGCAGCACTATTAGATGTTTCAAAACAATTTCCTATAGACAACAACATCCAGCAGCAAAACAGAACTTCACAGCAAGTATAA 1767 0.4273 MMDPSSPSISISQKQHPLPFPESVSALPSSPRHHYHNDTSDLLLIPHVPGSKLRLMCSYGGHIMPRDNSLYYVGGDTRIVAVDRHSSLSHLFSHLSRTLLHGRRPFTLKYHLPNEDLDNLITVSTDEDLQNMIDEYDRLSSNPSPSPSRLRLFLFFSKPDTAVSMGNGHFYNHAWFVEALNNSGILSRVVSDSAAAVDNCLLNLDDYDISASSNDENTNNNVIKEHLIDVDYSVPVEEEEEKNMFNYSIANLRVRVDHDDDGSGVKQEQRLRMEQQHENNFDNVKQQNDPFLESSYCHDGRAGYDFINRVVSDDRKPPLPSLIVQPRTTGASLGLPSPDSLASDSSVASACVDNKDTTLSNNIKSEVFDQNQQGEQAKDLDYTPPQQQLNQNQQPQTYQQHQFVYIHRPIGTGQVPLSSYYPVYAPPSQSHQLHQYPVYVMPIGHGSTQPYNMALQSNLSDTNVVASTMPLIPQSVVPEVNPSVYKTPMASNPSFIQVLSNQYQQQYVSLSQNIHHPPQKTIYGYEYGGGGATQEQVYYTQQQPANANAPPQYQSMTPAPAVAALLDVSKQFPIDNNIQQQNRTSQQV* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3835 588 MobiDBLite consensus disorder prediction 1 19 - -
Mtr8g3835 588 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 2 580 - -
Mtr8g3835 588 PANTHER OS05G0427100 PROTEIN-RELATED 2 580 - -
Mtr8g3835 588 MobiDBLite consensus disorder prediction 325 346 - -
Mtr8g3835 588 MobiDBLite consensus disorder prediction 315 346 - -
Mtr8g3835 588 SUPERFAMILY CAD & PB1 domains 67 166 - -
Mtr8g3835 588 Gene3D - 71 156 - -
Mtr8g3835 588 SMART PB1_new 65 157 IPR000270 GO:0005515
Mtr8g3835 588 Pfam PB1 domain 66 155 IPR000270 GO:0005515
Mtr8g3835 588 MobiDBLite consensus disorder prediction 1 33 - -
Mtr8g3835 588 CDD PB1_UP2 56 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3835 Mtr-Chr8 49017781 49019766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3835 25 154 MAP Kinase Kinase Kinase AT1G04700 40.909 3.47e-21 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3835 8 49017781 49019766 Mtr6g2133 6 38161359 38164926 ECH
Mtr1g4161 1 53200265 53203167 Mtr8g3835 8 49017781 49019766 ECH
Mtr8g3835 8 49017781 49019766 Mtr8g3835 8 49017781 49019766 ECH