Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3771 ATGACAACCCAATGCTCTCACAGTTTCCTCCTATTATCAATCCTCTTCTTCGCAGCCACATTCTCCAATCTCCGTTCGACAACCGCCACCGGAGCAGAACCTCCGACCACCACCAACGACGACGCCGAATTCATCCGTTCAAGTTGCAACGCAACACTCTACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTTCAACAGAATCCTGGCCAACTCGCTCGCATCGCCATAGCCGTAAGCTTCTCCAAAGTCCACCGAACTGCCTCTTATCTCTCCAATCTCACTCGCGAAGCAGATTACAGCGGTAGTTCACGCGCCACACTCGCTCTCCATGACTGTTTCTCAAATCTTGACGATGCTGTTGATGAAATCCGTGGTTCGCTTAAACAGATGCGGCAGATTGGAGCCGCCGGAACTGGCGCCGGTGCCGGAGCAGATTCGTTTCTGTTTCAGATGAGTAACGTGCAGACGTGGATGAGTGCGGCGCTTACTGATGAAGAAACATGTACGGATGGATTTCAAGATGTAGAAGATTGTCCGGTGAAAGCGGATGTACAGAATCGTGTCTCAAAGGTGAAAAAGTTGACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCACAAAAAGGAATGCCTTGA 651 0.4992 MTTQCSHSFLLLSILFFAATFSNLRSTTATGAEPPTTTNDDAEFIRSSCNATLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTREADYSGSSRATLALHDCFSNLDDAVDEIRGSLKQMRQIGAAGTGAGAGADSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPVKADVQNRVSKVKKLTSNALALVNGYAQKGMP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3771 216 SMART PMEI_2 40 206 IPR006501 GO:0004857
Mtr8g3771 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 210 IPR006501 GO:0004857
Mtr8g3771 216 Pfam Plant invertase/pectin methylesterase inhibitor 44 206 IPR006501 GO:0004857
Mtr8g3771 216 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 213 - -
Mtr8g3771 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 213 - -
Mtr8g3771 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 208 IPR035513 -
Mtr8g3771 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 210 IPR035513 -
Mtr8g3771 216 CDD PMEI-like_3 47 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3771 Mtr-Chr8 48257675 48258648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3771 10 216 Carbohydrate Esterase AT5G53370 26.066 2.08e-15 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3771 8 48257675 48258648 Mtr8g3771 8 48257675 48258648 ECH