Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3768 ATGCACAATATTTCATTTTCTAAGATGGATAAACTCATATTCAACTCTTGCATTGCATACTTTCTTCTTTTCTCTCTCTTGTTTGTGCATGGCAAAGAATTGTCATGCAATCAAACTCCATACCCTCATGTGTGCAACCATTATATTGGAACCACCACAAATAAACTATCAACCCTAGATTCTTCTTCTTCCTTCCATGATATTGTACTTAAGGTTACCTTGGACCAAGCCATTGAAGCACACAAACTTGTATCAACCATGGAATTAAATAATTTCAAAGACAAGCATGCCAAATCAGCATGGGAGGATTGTTTAGAGCTTTATGAGGATACAATATATCAACTCAAACGCTCAATAAACTCAAACAACCTAAATGATAAATTAACTTGGCAAAGTGCTTCCATTACCAATCATCAAACTTGCCAAAATGGTTTCATTGATTTCAACCTTCCATCTCACTTAAATTATTTCCCATCCATGTTAAGCAACTTCACTAAATTGCTTAGCAATTCTTTGTCCATTAGCAACACTCTAACTTCATCACAATCATCCTCATCCTCATCATCAAGTACTAAGCAAAACGGAGGGAGAAGGTTGTTATCAGATGGATTTCCATATTGGCTTTCAGGGTCAGATAGAAAGCTTCTTCAGGCAACACCGGGGTCAGGGATAGGACCAAGAGCTGATATTGTGGTTGCACAAGATGGAAGTGGGAACTATAAGACAATATCTGAGGGTGTGGCTGCAGCTGCTAAGCTTAGTGGAAAAGGGAGAGTGGTTATTCATCTGAAAGCAGGTATTTATAAAGAGAATGTTGATATCAAGAAGACAGTGAAGAATTTAATGATATTCGGAGATGGAATGGATTCTACTATTGTTACTGGCAATCATAATGCTATAGATGGTTCTACTACTTTTCGTTCAGCTACTTTTGGTGTTATGGGAGATGGTTTCATAGCTAAGGACATGACCTTTGAGAATACAGCAGGACCCCAAAAACACCAAGCAGTGGCTCTCCGTTCCGGTGCCGATCACTCTGTTTTCTACCGTTGCGCCTTCAAAGGCTTCCAAGACACTTTATATGTTTACGCCAACCGTCAATTCTACCGTGACTGCAACATCTATGGAACAATCGATTTCATCTTCGGTAACGCCGTTACTGTCCTTCAAAACTGCAACATCTTTGTCAGAAAACCAATGAGCAACCAACAGAACACCGTAACAGCACAAGGAAGAACAGATCCAAATGAAAACACTGGAATTGTAATACATAACTGCCGTATAACCGCATCAAGTGATTTGAAAGCGATTCAGAATTCAGTTAAAACATATCTTGGTAGACCATGGCAGAAATATTCAAGAACGGTTGTTATGAAAAGTAATCTTGATGGTTTGATAAATTCAGAAGGTTGGGCTCCATGGATGGGTGGTTTTGCTTTGAGTACACTTTATTATGGCGAATATATGAATGTTGGTGGTGGTGCTAATACTGATGGAAGAGTTAAATGGCCTGGTTTTCATGTTATTACTAATCCTTCTGATGCAGTTAAATTTTCTGTTGGTAATTTTTTGGCTGGTGATTCTTGGATTTCTGGTAGTGGTGTGCCGTTTGATGCAGGTTTGTGA 1626 0.3881 MHNISFSKMDKLIFNSCIAYFLLFSLLFVHGKELSCNQTPYPHVCNHYIGTTTNKLSTLDSSSSFHDIVLKVTLDQAIEAHKLVSTMELNNFKDKHAKSAWEDCLELYEDTIYQLKRSINSNNLNDKLTWQSASITNHQTCQNGFIDFNLPSHLNYFPSMLSNFTKLLSNSLSISNTLTSSQSSSSSSSSTKQNGGRRLLSDGFPYWLSGSDRKLLQATPGSGIGPRADIVVAQDGSGNYKTISEGVAAAAKLSGKGRVVIHLKAGIYKENVDIKKTVKNLMIFGDGMDSTIVTGNHNAIDGSTTFRSATFGVMGDGFIAKDMTFENTAGPQKHQAVALRSGADHSVFYRCAFKGFQDTLYVYANRQFYRDCNIYGTIDFIFGNAVTVLQNCNIFVRKPMSNQQNTVTAQGRTDPNENTGIVIHNCRITASSDLKAIQNSVKTYLGRPWQKYSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGRVKWPGFHVITNPSDAVKFSVGNFLAGDSWISGSGVPFDAGL* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3768 541 Gene3D - 226 541 IPR012334 -
Mtr8g3768 541 MobiDBLite consensus disorder prediction 178 198 - -
Mtr8g3768 541 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
Mtr8g3768 541 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
Mtr8g3768 541 CDD PMEI-like_3 34 179 - -
Mtr8g3768 541 SUPERFAMILY Pectin lyase-like 224 540 IPR011050 -
Mtr8g3768 541 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Mtr8g3768 541 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 27 540 - -
Mtr8g3768 541 TIGRFAM PME_inhib: pectinesterase inhibitor domain 35 179 IPR006501 GO:0004857
Mtr8g3768 541 MobiDBLite consensus disorder prediction 178 197 - -
Mtr8g3768 541 PANTHER PECTINESTERASE 27 540 - -
Mtr8g3768 541 SMART PMEI_2 24 174 IPR006501 GO:0004857
Mtr8g3768 541 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Mtr8g3768 541 Pfam Pectinesterase 229 527 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3768 Mtr-Chr8 48200036 48228328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3768 11 541 Carbohydrate Esterase AT1G23200 52.057 0.0 549
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3768 8 48200036 48228328 Mtr8g3768 8 48200036 48228328 ECH