Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3766 ATGAGAACCCTTTTCATTATATTATTCACCATTATTTCCTTCTCAACAATTTTGCCACTATCCAACTCTCAAAAAAATGACACTTTTTCTACTTGCAACGAATCATATTTCACATGTGGAACAAACACAAATGTATCATTTCCTTTTTGGGGAAAGAACCGACCAAATATTTGTGGCAAAAATGAGTTCAAACTCACTTGCATGCATAACCAAAATACTTCTGTTCAAATTGGTTCACAAAAGTTCAATGTACTAAACATTAACCAAACAGCTTCTACCATGAAAATTGTTAGAACAAATCTTATCAATGATATTTGTTCTTCAAATTTCACCAACACTTCTTTGAATGGAAGTCCATTTACTTTTCTTCCAAATGTTCAGAATCTCACTGTATTCTATAATTGTCCCATTGAAAATAGTTCAATTATTGGAAAAAACATAAACAGTTTTACGTGTGAAAATAATGGTAGCAATAAACATGTTTTCTACGTGGTGAAGAATGAAACTCAGTTACAAAACCAATTCTCAAACCTTCAGAACTGTGGGGCTAGTGTTCAAGTGCAAGTTTCTATGGATGGTGTTTCTGAGAGTGGAGTTGAGGTAGTGCAAGAAGGATTTGATGTGAAGTATGATGAAGGTGCAGGGTGGTCCTCAGAGTGTGAAGTGTGTAGGGAATCTGGAGGAACATGTGGTACCAATCAGAATGATTCTTCTCAGTTTTCTTGTTATTGTCCTGGTGGAACTCATGCTGCAAATTGTTCTGCTCGCAAAAGTAGCAAAAGGACCAAAGTGTTGAAGCTGGTACTAGGTTTCGTAGGTACTGGAATGTTACTACCTCTTATTGCTGTCATAATATGCCGAAATAAAGCTAAGATATGGAAGGTTATAAAAACACAATTCAGCAAAATAACAAGGAACAATCAGCATATAGAAGACTTCCTTGAAAGTCAAGGTCCTCTGAATATAAAAAGATACAGTTACTCTGATATAAAGAAAATGACTGAATCCTTCAAAGTTAAACTAGGAGAAGGTGGTTATGGTTCTGTATACAAAGGAAAATTGCTCAATGGTGGTTCTGTGGCTGTAAAAGTATTGAGTGAGTCAAAAGGGTGTGGAGAAGATTTCATAAATGAAGTGGCAACCATATGCAAAACATCTCATGTTAATGTTGTCACTCTTTTAGGATTTTGTCTTGATGGAACCAAAAAAGCTCTCATCTATGAGTTTATGTCCAATGGTTCACTTGAAAAGTTCATTCAAAATCACAACAAAGAATCCGAAAAAGCGGAAAAAACTAAGACTAGTCCTTCATTGAGTTGGGAGAATTTACACCAGATTGCAATAGGGATAGCTCGAGGACTAGAGTACTTGCATAAAGGGTGCAACACTAGGATTTTTCATTTCGACATTAAACCACATAACATTCTTTTGGACGAAACTTACCGTCCCAAGATATCTGATTTTGGACTTGCTAAACTAAGCACAAGCAATGAGAGCATTATTTCAATGTCAAACGCTAGAGGGACTGTTGGGTATGTTGCTCCTGAAGTTTTCAACAAAAGTTTCGGGGGCGTTTCACATAAGTCTGATGTCTATAGTTACGGAATGATGTTGCTAGAAATGGTTGGTGGGCGGAAGAACGTTAACATTGTTGAAGCTAGTCGTTCGAGCGAGTTATATTTTCCGCATTTGGTGATCTATAAGAAGCTTGAGAAGGGAAATGATTTGGAACTTGATGATGGGGTAATGTCTAATGAGGAAAATGAGATAGCTAAGAAATTGACTATGGTTGGTTTGTGGTGCATTCAAACAATTCCTACTCATAGACCTACAATAAGTAAAGTGATTGATATGTTGGATGGTAGCATGGATTCTTTGGAAATGCCACCAAAACCTGTAATGTTTTCTCCTCCAAGATCAATACCAGAATTTTCTACTTCATCAAAATCATTGGAAAGCTTCTCTAGCTAA 1971 0.3638 MRTLFIILFTIISFSTILPLSNSQKNDTFSTCNESYFTCGTNTNVSFPFWGKNRPNICGKNEFKLTCMHNQNTSVQIGSQKFNVLNINQTASTMKIVRTNLINDICSSNFTNTSLNGSPFTFLPNVQNLTVFYNCPIENSSIIGKNINSFTCENNGSNKHVFYVVKNETQLQNQFSNLQNCGASVQVQVSMDGVSESGVEVVQEGFDVKYDEGAGWSSECEVCRESGGTCGTNQNDSSQFSCYCPGGTHAANCSARKSSKRTKVLKLVLGFVGTGMLLPLIAVIICRNKAKIWKVIKTQFSKITRNNQHIEDFLESQGPLNIKRYSYSDIKKMTESFKVKLGEGGYGSVYKGKLLNGGSVAVKVLSESKGCGEDFINEVATICKTSHVNVVTLLGFCLDGTKKALIYEFMSNGSLEKFIQNHNKESEKAEKTKTSPSLSWENLHQIAIGIARGLEYLHKGCNTRIFHFDIKPHNILLDETYRPKISDFGLAKLSTSNESIISMSNARGTVGYVAPEVFNKSFGGVSHKSDVYSYGMMLLEMVGGRKNVNIVEASRSSELYFPHLVIYKKLEKGNDLELDDGVMSNEENEIAKKLTMVGLWCIQTIPTHRPTISKVIDMLDGSMDSLEMPPKPVMFSPPRSIPEFSTSSKSLESFSS* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3766 656 Gene3D Phosphorylase Kinase; domain 1 309 409 - -
Mtr8g3766 656 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
Mtr8g3766 656 Pfam Protein kinase domain 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3766 656 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 5 654 - -
Mtr8g3766 656 MobiDBLite consensus disorder prediction 637 656 - -
Mtr8g3766 656 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 654 IPR045874 GO:0004672
Mtr8g3766 656 Pfam Wall-associated receptor kinase C-terminal 152 246 IPR032872 -
Mtr8g3766 656 SUPERFAMILY Protein kinase-like (PK-like) 322 648 IPR011009 -
Mtr8g3766 656 MobiDBLite consensus disorder prediction 640 656 - -
Mtr8g3766 656 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mtr8g3766 656 Pfam Wall-associated receptor kinase galacturonan-binding 32 98 IPR025287 GO:0030247
Mtr8g3766 656 ProSiteProfiles Protein kinase domain profile. 335 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3766 656 SMART serkin_6 335 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3766 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3766 Mtr-Chr8 48165644 48169597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3766 3 649 Receptor kinase-like Gene Family AT5G38260 38.872 2.95e-149 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr8g3766 Pkinase 4.4e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3766 8 48165644 48169597 Mtr8g3766 8 48165644 48169597 ECH
Mtr8g3766 8 48165644 48169597 Mtr6g2155 6 38569727 38611855 PCT
Mtr6g2157 6 38626491 38630248 Mtr8g3766 8 48165644 48169597 PCT