Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3738 ATGGCTCTAATTCTTAGCCAATTGTTTATTTCCTTAATACTGTCACTCTTCTTCTCGCTTACTCTTCTTCCCCATGCTACTACTAGTAAAGCTAATTCCTCCTCCGAATATTCCATAACCTCTATTTTCAACGTCACAGCCGCAAACCACAAAACCAGCCAAATCCTCTCCTTCAAACCATTTCATAATCAAGAAGAATTCCCCCAAACATTTTCATCATCTTCTTCCTTCAAGCTCAAACTATATCCAGCTGCATCTCTCTATAATACTCATCATCAACACAAGAACTACTATAGCTTAGACCTAAATGCTTCGTTGAACCCAGGCATAACCACAGGAACCAGCAATTTCTTAGTACAAATCGGAGTTGGAGGACCACCACAAAAATTCTACATGATTTTCGACCTCCAAACCGATTTCACTTGGCTTCAATGCCAACCATGTATCAAATGTTACGATCAACCTGATTCCATTTTCGACCCATCACAGTCCTCTTCATACACCCTACTTTCCTGCGAAACCAAACACTGTAACTTACTTCCAAATTCTTCTTGTAGCGATGATGGTTATTGTAGATACAATATTACCTACAAAGACGGTACAAATACTGAAGGTGTTTTAATAAATGAAACGGTGTCGTTTGAAAGCTCTGGATGGGTGGATAGGGTTTCATTAGGTTGCAGTAATAAAAACCAAGGTCCATTTGTAGGGTCTGACGGAACATTTGGGTTAGGTCGTGGGTCACTGTCTTTTCCATCTCGTATTAATGCATCGTCAATGTCATATTGTTTAGTGGAAAGTAAAGATGGATATTCGTCGTCAACTTTGGAATTCAATTCGCCGCCATGTAGTGGTTCGGTTAAAGCTAAGTTGTTGCAAAATCCGAAGGCTGAGAATTTATACTATGTGGGACTAAAAGGAATTAAAGTGGGAGGTGAAAAGATCGATGTTCCTAATTCAACATTCACTATTGATCCATATGGAAACGGAGGTATGATTGTAAGTTCAAGTAGTTTAATAACGATGTTGGAGAATGACACCTATAATGTCGTGCGTGATGCTTTTGTGGCCAAGACTCAACATTTGGAACGTTTAAAGGCTTTTTTACAGTTTGACACATGTTATAATTTGTCGTCTAATAATACTGTGGAGTTGCCGATATTGGAGTTTGAAGTAAATGATGGGAAATCGTGGTTGTTGCCGAAGGAGAGTTATTTGTATGCAGTGGATAAGAATGGAACATTTTGCTTTGCGTTTGCACCGTCAAAAGGATCGTTTTCAATTTTAGGGACTTTACAGCAATACGGGACACGTGTCACCTTTGATCTTGTTAACTCTTTCGTTTATTTACACACCCTCTGCTGCAACTAG 1371 0.3917 MALILSQLFISLILSLFFSLTLLPHATTSKANSSSEYSITSIFNVTAANHKTSQILSFKPFHNQEEFPQTFSSSSSFKLKLYPAASLYNTHHQHKNYYSLDLNASLNPGITTGTSNFLVQIGVGGPPQKFYMIFDLQTDFTWLQCQPCIKCYDQPDSIFDPSQSSSYTLLSCETKHCNLLPNSSCSDDGYCRYNITYKDGTNTEGVLINETVSFESSGWVDRVSLGCSNKNQGPFVGSDGTFGLGRGSLSFPSRINASSMSYCLVESKDGYSSSTLEFNSPPCSGSVKAKLLQNPKAENLYYVGLKGIKVGGEKIDVPNSTFTIDPYGNGGMIVSSSSLITMLENDTYNVVRDAFVAKTQHLERLKAFLQFDTCYNLSSNNTVELPILEFEVNDGKSWLLPKESYLYAVDKNGTFCFAFAPSKGSFSILGTLQQYGTRVTFDLVNSFVYLHTLCCN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3738 456 Pfam Xylanase inhibitor C-terminal 301 447 IPR032799 -
Mtr8g3738 456 ProSiteProfiles Peptidase family A1 domain profile. 117 451 IPR033121 -
Mtr8g3738 456 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 107 450 - -
Mtr8g3738 456 Pfam Xylanase inhibitor N-terminal 117 278 IPR032861 -
Mtr8g3738 456 PANTHER ASPARTYL PROTEASES 107 450 IPR001461 GO:0004190|GO:0006508
Mtr8g3738 456 SUPERFAMILY Acid proteases 109 455 IPR021109 -
Mtr8g3738 456 Gene3D Acid Proteases 284 456 IPR021109 -
Mtr8g3738 456 Gene3D Acid Proteases 89 278 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3738 Mtr-Chr8 47858194 47859564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3738 117 310 Miscellaneous Gene Families AT1G77480 26.126 4.57e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3738 8 47858194 47859564 Mtr6g2207 6 39431551 39433606 ECH
Mtr8g3738 8 47858194 47859564 Mtr8g3738 8 47858194 47859564 ECH