Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2667 ATGTCTCAGTTGTATATACCATACAAAAAATACCCACCATACAAACTTATTCTCCTTCTCACTTTCCCTCCTTTGAATTTTATAAAAACACATAAAGCAATTCTCTTTTCACAAAGTTTTTTCCCACAACAAATTCTCATCATACTACTCACTCACTCTCTCTCTCTCTCTCTTTCATTCCTCTTTCCACACTCCTCAACTCACTCTATATTTTCTTGCAAGTTCTCTCTTTCTACAAGCTTGTTAATTTTCTCAATGGAGAATAACCCACTTCAGCTTTTACCTCACCTCACTGTAACACTCCTTATGATCATTATCATAGTTTTGTTTCCTTTGATTACTGCTGAAGCAACTGCAACAGTTTCTTCTATCAAAACTGATGCAAAGGCCCTTCTTGCATTCAAAAAATTGATTCAGAATGATCCAAATGGAGCTTTATCAAGTTGGAATCCAAAAACCAATCCATGCACATGGGATGGTGTGACTTGCACCCTTGGAAGAGTCACTGGTCTTGAAGTTAGTGGAAACAATGATGTTTCCGGAATTATTTCTCTTGATCCTTTATCTTCTTTAGATATGTTATCTGTTTTGAAATTTTCTCTTAATTCATTTTCTGTAAATTCCACTTCCTTGCTTAAGTTACCATATAGTATAACACAACTTGATCTATTCCTTGGTAAAGTTTTAGGTCCTGTTCCTGAAAATTTATTCTCCAACTGTCCTAATCTTGTTGTTGTAAATCTTTCTTACAACAATCTGACAGGTCCTATTCCTGATAACTTTATACAAAATTCTGATAAGCTTCAGTCCCTTGATTTATCTTTCAACAATTTGACAGGTTCAATTTCTGATATCAAAATTGATTGTAAATCATTGTTGCAACTTGATCTATCAGGAAACAATTTATCAGACTCATTTCCAATTTCTTTGTCAAATTGCACAAGCCTTAAGAGTTTGAATTTAGCAAGCAATTTTATTTCTGGTGGAATTCCAAAGGCTTTAGGCCAATTGAATAAATTACAGTCTTTGGATCTTTCACACAATCAAATTACCGGTTGGATCCCTTCTGAATTGTCAAATGTTTGTGGTTCTCTTTTAGAACTTAAACTTTCTTTCAACAATATTACTGGTTCAGTTCCATTTGGTTTCAATTCTTGCACTTGGCTTCAACTAGTTGATATTTCCAACAACAATATGACAGGTGAATTACCTGAGTCGGTAATTCGGAGCCTCGGATCATTGCAGGAACTTAGGTTGGGAAATAATGCTATTTCTATGAAATTTCCATCTTCAATATCTTCATTGAAAAAATTGAGGATTGTGGATTTTAGTTCAAATAAAATTTATGGATCCATCCCTAGAGATTTGTGTCCAGGTGCAGGTTCACTTGAGGAGCTCAGAATGCCTGATAATCTCATAACAGGTGAAATTCCAGCTGAATTGTCAAAGTGTTCACAGTTGAAGACTATTGATTTTAGTTTGAACTATCTCAATGGTTCAATTCCTGATGAGTTAGGAGAGCTTGAGAATCTTGAGCAGCTAATAGCATGGTTCAATGGTTTGGAAGGAAAAATTCCACCAAAATTGGGACAATGTAAGAATCTTAAGGATCTTATATTGAATAATAATCACCTTAGTGGTGGAATTCCAACTGAGTTGTTCAACTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCACAGGCGAAATACCACGAGAGTTCGGACTTTTGACAAGGTTAGCTGTTCTGCAGCTTGGAAACAACGGTTTTACAGGTGAGATACCATCAGAGCTAGGAAATTGCAACAGTTTGGTGTGGTTGGACTTGAACAGCAACAAACTCACAGGAGAGATCCCTCCTAGACTTGGAAGGCAGCAAGGAGCAAAATCGTTGTTTGGCATTCTTTCAGGAAACACTTTGGTGTTTGTAAGAAATGTCGGAAACTCGTGTAAAGGAGTTGGAGGTTTGCTAGAATTCTCAGGAATCCGATCCGAACGGCTGTCGCAGGTAGCATCATTGAGGTCTTGTGATTTCACAAGACTTTATTCCGGTCCTGTACTCAGCTTGTTTACAAAATACCAGACTCTGGAGTATCTTGATCTCTCCTACAATCAGCTTCGTGGAAAAATACCGGACGAATTTGGAGATATGGTGGCCTTACAGGTACTTGAATTGTCTCACAATCAACTATCTGGTGAAATCCCTTCAACCCTTGGCCAGCTCAAAAATATAGGAGTGTTTGATGCATCACATAATAGACTACAGGGTACTATCCCAGACTCATTCTCAAACCTATCATTTTTGGTGCAAATAGACCTATCTTACAATGAGTTAACTGGTCAAATTCCATCTAGGGGACAACTAAGTACACTTCCAGCCACTCAGTATGCAAACAATCCAGGTCTTTGCGGCGTTCCATTGCCGGAGTGTAAAAATGACAACAGCCAATCTACATCAAATCCAAGTGATGATTTTGGCAGAGGAGGACATAGAAGATCAGTTGCATCATGGGCAAACAACATTGTTATGGGAATTCTCATTTCTGTTGCTTCTGTATGTATTTTAATCGTGTGGGCGATTGCGATGCGCGTAAGGAGGAGAGAGGCCAAGGAAGTCAAGATGCTTAATAGATTGCAAGCATGCCATGCTGCTACAACATGGAAAATTGATAAAGAGAAAGAGCCGTTAAGCATTAATGTTGCAACATTTCAGAGGCAATTGAGGAAGCTTAAATTCTCACAGTTGATTGAAGCAACCAATGGTTTCTCAGCAGAAAGCCTCATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGACGGAACATGTGTCGCGATAAAGAAGCTCATTCGACTGAGTTGCCAAGGCGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGAAAAATCAAGCATAGAAACCTTGTCCCTTTATTGGGATACTGCAAAGTAGGAGAAGAAAGGCTACTTGTTTATGAATACATGGAATATGGAAGCCTGGAAGAGATGCTCCATGGAAGAATAAAGACACGTGATCGACGAATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGACTTTGTTTTCTGCATCATAATTGCATCCCTCACATCATACACAGAGACATGAAATCAAGCAATGTGTTACTTGACAATGAAATGGAGTCAAGAGTCTCGGATTTCGGAATGGCAAGACTAATAAGTGCACTCGATACACATCTCAGTGTAAGCACACTAGCAGGAACACCTGGATATGTTCCACCAGAGTATTACCAAAGTTTCAGGTGCACTGCAAAGGGTGATGTTTATTCATTTGGTGTTGTAATGTTGGAACTTCTTAGTGGGAAAAGGCCTACTGATAAGGAGGATTTTGGTGACACAAACTTGGTTGGATGGGCTAAGATTAAGGTGCGCGAAGGGAAACAAATGGAAGTAATCGACACTGATTTGCTTTTGGAGAGTCAAGGAGGAACAAATGAAGCAGAAGTGAAAGAAGTGAAAGAAATGCTAAGATATTTGGAGGTTACTTTGCGGTGTGTCGATGATTTGCCTTCTAGAAGGCCAAGCATGTTGCAGGTAGTGGCCTTGTTGAGAGAGCTTATACCTGGATCAACTGATGGAAGTAGCAGCAGTGCTTAA 3672 0.3894 MSQLYIPYKKYPPYKLILLLTFPPLNFIKTHKAILFSQSFFPQQILIILLTHSLSLSLSFLFPHSSTHSIFSCKFSLSTSLLIFSMENNPLQLLPHLTVTLLMIIIIVLFPLITAEATATVSSIKTDAKALLAFKKLIQNDPNGALSSWNPKTNPCTWDGVTCTLGRVTGLEVSGNNDVSGIISLDPLSSLDMLSVLKFSLNSFSVNSTSLLKLPYSITQLDLFLGKVLGPVPENLFSNCPNLVVVNLSYNNLTGPIPDNFIQNSDKLQSLDLSFNNLTGSISDIKIDCKSLLQLDLSGNNLSDSFPISLSNCTSLKSLNLASNFISGGIPKALGQLNKLQSLDLSHNQITGWIPSELSNVCGSLLELKLSFNNITGSVPFGFNSCTWLQLVDISNNNMTGELPESVIRSLGSLQELRLGNNAISMKFPSSISSLKKLRIVDFSSNKIYGSIPRDLCPGAGSLEELRMPDNLITGEIPAELSKCSQLKTIDFSLNYLNGSIPDELGELENLEQLIAWFNGLEGKIPPKLGQCKNLKDLILNNNHLSGGIPTELFNCSNLEWISLTSNELTGEIPREFGLLTRLAVLQLGNNGFTGEIPSELGNCNSLVWLDLNSNKLTGEIPPRLGRQQGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRSERLSQVASLRSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPDEFGDMVALQVLELSHNQLSGEIPSTLGQLKNIGVFDASHNRLQGTIPDSFSNLSFLVQIDLSYNELTGQIPSRGQLSTLPATQYANNPGLCGVPLPECKNDNSQSTSNPSDDFGRGGHRRSVASWANNIVMGILISVASVCILIVWAIAMRVRRREAKEVKMLNRLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGCGGFGEVFKATLKDGTCVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDNEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKIKVREGKQMEVIDTDLLLESQGGTNEAEVKEVKEMLRYLEVTLRCVDDLPSRRPSMLQVVALLRELIPGSTDGSSSSA* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2667 1223 Pfam Leucine Rich repeat 267 280 IPR001611 GO:0005515
Mtr8g2667 1223 Gene3D Ribonuclease Inhibitor 167 813 IPR032675 -
Mtr8g2667 1223 Gene3D Transferase(Phosphotransferase) domain 1 1001 1218 - -
Mtr8g2667 1223 ProSitePatterns Protein kinases ATP-binding region signature. 931 954 IPR017441 GO:0005524
Mtr8g2667 1223 Gene3D Phosphorylase Kinase; domain 1 884 1000 - -
Mtr8g2667 1223 Pfam Leucine rich repeat N-terminal domain 125 163 IPR013210 -
Mtr8g2667 1223 SUPERFAMILY RNI-like 285 526 - -
Mtr8g2667 1223 SUPERFAMILY Protein kinase-like (PK-like) 906 1208 IPR011009 -
Mtr8g2667 1223 SUPERFAMILY Outer arm dynein light chain 1 183 329 - -
Mtr8g2667 1223 MobiDBLite consensus disorder prediction 813 827 - -
Mtr8g2667 1223 ProSiteProfiles Leucine-rich repeat profile. 339 360 IPR001611 GO:0005515
Mtr8g2667 1223 PRINTS Leucine-rich repeat signature 268 281 - -
Mtr8g2667 1223 PRINTS Leucine-rich repeat signature 337 350 - -
Mtr8g2667 1223 Pfam Brassinosteroid receptor island domain 635 693 IPR045381 -
Mtr8g2667 1223 MobiDBLite consensus disorder prediction 812 832 - -
Mtr8g2667 1223 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 113 1211 - -
Mtr8g2667 1223 SUPERFAMILY L domain-like 462 812 - -
Mtr8g2667 1223 Gene3D - 638 694 - -
Mtr8g2667 1223 ProSiteProfiles Protein kinase domain profile. 925 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2667 1223 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1049 1061 IPR008271 GO:0004672|GO:0006468
Mtr8g2667 1223 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 113 1211 - -
Mtr8g2667 1223 Pfam Leucine rich repeat 534 592 IPR001611 GO:0005515
Mtr8g2667 1223 Pfam Leucine rich repeat 292 350 IPR001611 GO:0005515
Mtr8g2667 1223 Pfam Leucine rich repeat 692 733 IPR001611 GO:0005515
Mtr8g2667 1223 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Mtr8g2667 1223 SMART LRR_typ_2 606 628 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 337 360 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 508 532 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 720 744 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 580 604 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 533 556 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 435 459 IPR003591 -
Mtr8g2667 1223 SMART LRR_typ_2 411 434 IPR003591 -
Mtr8g2667 1223 CDD STKc_IRAK 931 1211 - -
Mtr8g2667 1223 SMART serkin_6 925 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g2667 1223 Pfam Protein kinase domain 927 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2667 Mtr-Chr8 37324884 37328904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2667 102 1211 Receptor kinase-like Gene Family AT1G55610 46.972 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr8g2667 Pkinase 7.1e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2667 8 37324884 37328904 Mtr8g2667 8 37324884 37328904 ECH