Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2652 ATGGTTTTTCCAAAGCCAGCTTCTGAGTCTGACCTTATTCTTCACTCTAACTTTATCTCTCGTTATGCTAAGGACTCTATTCCTAGGTTTAGCATGCCAGAGAACTCAATGCCAAAGGAAGTTGCATACCAGAACATACACGATGAGTTGCAGTTGGATGCTAATCCAAAGCTTAATTTGGCTTCTTTTGTTACCACATCCATGGAGGAAGAATGCAACAAGCTTATTATGGAATCTATCAACAAGAACTATGTTGATATGGATGAGTATCCAGCAACCACTGATCTTCATAATCGATGTGTGAACATGATAGCGCGTTTGTTCAATGCTGAGATAGGAGAAAATGAGAGTGCAGTTGGTGCAGGAACAGTTGGATCATCAGAGGCCATAATGCTGGCAGGACTTGCATTCAAAAAGAAGTGGCAGAACAAACGCAAGGCTGAGGGTAAACCTTATGATAAGCCTAACATGGTCACTGGTGCCAATGTGCAGGTATGTTGGGAGAAATTTGCTAGGTACTTTGAGGTGGAATTAAGAGAAGTAAAGGTGAGAGAAGACTACTATGTGATGGACCCTGCCAAGGCTGTTGAGATGGTAGATGAGAACACAATTTGTGTGGCTGCAATCTTAGGTTCAACTTATAATGGAGAATTTGAAGATGTCAAACTCTTGAATGATCTCTTGTTAGAAAAAAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCTGCAAGTGGTGGATTTATAGCTCCTTTCCTATATCCAGAGCTAGAGTGGGATTTCAGACTCCCATTAGTGAAGAGCATAAATGTTAGTGGTCACAAATATGGCCTTGTTTATGCTGGAATTGGCTGGGTTATATGGAGGACCAAAGAAGACTTGCCTGAAGACCTTGTCTTCCATATTAATTACCTTGGCGCGGACCAACCCACATTCACCCTAAATTTTTCAAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGCCTTGGTCAAGAGGGTTACCGGAGTATAATGGAGGACTGCAGAGAAAACGCAATGGTGTTGAAGGAACACTTGGAAGAAACTGGATACTTTAACATACTCTCAAAAGACAACGGTGTTCCTATGGTAGCATTTTCTCTCAAGGACAGTAGCCAGCAGTACGATGAATTCAAGATATCAAAGATGTTGCGGCGCCATGGTTGGGTTGTACCGGCATATCCGATGCCACCTGGTGCTCACCACATCAAAGTGCTCCGTGCGGTCATCAGAGCTGACTTTTCGCGCACACTTGTTGAACACCTTGCGCTTGACATAAAAAATGTGTTGCATGAGCTTCATAAAATTCCCCTAGACATTAACGATGAGAAGTTCTTGGTTGACACTGCATTGGGTGAACACAGAGAAATCATTGCTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGTCTAG 1452 0.4229 MVFPKPASESDLILHSNFISRYAKDSIPRFSMPENSMPKEVAYQNIHDELQLDANPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFNAEIGENESAVGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVKVREDYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMEDCRENAMVLKEHLEETGYFNILSKDNGVPMVAFSLKDSSQQYDEFKISKMLRRHGWVVPAYPMPPGAHHIKVLRAVIRADFSRTLVEHLALDIKNVLHELHKIPLDINDEKFLVDTALGEHREIIAQESNKRQKIMAV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2652 483 Gene3D - 361 449 - -
Mtr8g2652 483 CDD DOPA_deC_like 59 439 - -
Mtr8g2652 483 Gene3D - 1 65 - -
Mtr8g2652 483 PANTHER GLUTAMATE DECARBOXYLASE 1 482 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mtr8g2652 483 SUPERFAMILY PLP-dependent transferases 21 447 IPR015424 -
Mtr8g2652 483 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 445 IPR010107 GO:0004351|GO:0006536|GO:0030170
Mtr8g2652 483 Gene3D - 66 360 IPR015421 GO:0003824
Mtr8g2652 483 PANTHER GLUTAMATE DECARBOXYLASE 1 482 - -
Mtr8g2652 483 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2652 Mtr-Chr8 37170806 37173496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2652 1 453 Calmodulin-binding Proteins AT2G02010 77.925 0.0 759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g2652 8 37170806 37173496 Mtr8g2652 8 37170806 37173496 ECH