Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2582 ATGATCCAAGAACTCTTTGGTAATGGTGCTAGTGCTACCCTCACATCAAGTGAAAGAAACTACTCTTCCATTAATGGAGGAGTTTTACTTCAACCAACAACACAACCTCCTTCTTCATGTCCATCTTCCACAACCACCACCACCACTGCACCAACCACCGTCACCACAACCACCACCACCTCATCAGAAAACCAACAACATCTAAGGTGTCCAAGATGCGACTCATCAAACACAAAATTTTGTTACTACAACAACTATAACCTCACTCAGCCTCGCCATTTCTGCAAGACATGCCGTCGTTATTGGACAAAAGGAGGTGCTTTAAGAAACGTTCCAATTGGAGGTGGCTGCCGGAAAAACAAGAGCATCGGTGCCTCAAACAACGCGGCAAAAATAGCTACAAACAAGATGAAAACAGTTTCTTCTTCGGAGTTTATTGGAAGGTCAACAAGTGGTCAAGGGTTTGATCTCGAACACGTTGTTCCACCACAAAGTCAAATCCTATGGGGTTCTCCTCAAAATTCTCATATACTTTCTTTGCTAAGATCTAGTCAAAACCAAAACCCTAACCCTAATCATGTTAAGGAAGAAGGCAATAACTTCATAGGGTCCCATGTTTCTCACATGATGAGTTCTCAGCCGTTGATTTCGTCAAATGGTTATGATGGTGTTGGACATGTTTTATGCAACCCATTTTGGAGAAACAATCATGATAATCAAACTCAACAATTACAAAATGGTGGATTTGTACTTGGGGATCAACAACATCAGCATCATCAAAACAGTGGAATCCAAGAACTGTACCAGAAACTAAGGTCATCAACAACTTTCCCTAGTAACAGTGTTGGTGATATTTCATCTTCACCAACGGTATTACTAGGGAACGCGGCTTCAAATTCTTCGTCTATATCCAACATTTTGGAGACAACTTCAGTTACTGGTGGTGAATTAGGGTACTGGAATCCAATTCCAACCCTTACTTGGTCTGATCTTCCAACTACCAATGGTGCAATTCAAACCCAATATCAGTAA 1032 0.4138 MIQELFGNGASATLTSSERNYSSINGGVLLQPTTQPPSSCPSSTTTTTTAPTTVTTTTTTSSENQQHLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSIGASNNAAKIATNKMKTVSSSEFIGRSTSGQGFDLEHVVPPQSQILWGSPQNSHILSLLRSSQNQNPNPNHVKEEGNNFIGSHVSHMMSSQPLISSNGYDGVGHVLCNPFWRNNHDNQTQQLQNGGFVLGDQQHQHHQNSGIQELYQKLRSSTTFPSNSVGDISSSPTVLLGNAASNSSSISNILETTSVTGGELGYWNPIPTLTWSDLPTTNGAIQTQYQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2582 343 Pfam Dof domain, zinc finger 66 122 IPR003851 GO:0003677|GO:0006355
Mtr8g2582 343 ProSiteProfiles Zinc finger Dof-type profile. 68 122 IPR003851 GO:0003677|GO:0006355
Mtr8g2582 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 337 IPR045174 GO:0003700|GO:0006355
Mtr8g2582 343 ProSitePatterns Zinc finger Dof-type signature. 70 106 IPR003851 GO:0003677|GO:0006355
Mtr8g2582 343 PANTHER F-BOX FAMILY PROTEIN 17 337 - -
Mtr8g2582 343 MobiDBLite consensus disorder prediction 32 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2582 Mtr-Chr8 36286133 36287705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2582 68 128 C2C2-Dof Transcription Factor Family AT1G07640 81.967 3.01e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr8g2582 zf-Dof 9.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2582 - - vra:106766838 339.347