Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2573 ATGACATCTTCGGACTCCGGTGAAAGCCGCCGATCAACAAAACCTCAAATCCGCCCCGGTGCACCGGCACCGGAGCAAGAGAATCTTCCATGTCCACGTTGTGATTCAACCAACACTAAGTTTTGTTACTACAACAACTACAACTACTCTCAGCCACGTCATTTCTGCAAAGCTTGCCGCCGCTACTGGACTCACGGTGGAACCCTCCGTGACATCCCTGTCGGTGGTGGTACCAGAAAAAACGCCAAACGCTCTCGTACTAATCATGTTGCTGTCACTTCCTCATCCGCTGTGACTTCAGCGGCGCCGGAGCACCATCATTATCAGACAATCTCCGCCGTACAAGGAGGGTCTTTTCCATTTTCCGGCGGTGTTGACGGTGATGGTAAACAGAATATGAGTGTTTGCGGAAGCTTCACTTCTTTGTTGAACAACAACAACAACAACAACCAAAGCTCTGGGTTTCTTGCATTAGGTGGATTTGGGCTTGGGCTTGAAGAAATGGGATTTGGGATTGGAAGAACAGGTTGGGCTTTTCCAGGAATGATGGATGGTGTTCCTGTTGTGTCTTCTGGTGTTGTTGGAAACACGTGGCAGTTAGAAGGTGGTGAAGGTGGTTTTGTTGGTGCTGGTGATTGTTTCTCTTGGCCTGGACTTGCTATTTCAACACCAGTAAATGGTCTCAAATGA 690 0.487 MTSSDSGESRRSTKPQIRPGAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVGGGTRKNAKRSRTNHVAVTSSSAVTSAAPEHHHYQTISAVQGGSFPFSGGVDGDGKQNMSVCGSFTSLLNNNNNNNQSSGFLALGGFGLGLEEMGFGIGRTGWAFPGMMDGVPVVSSGVVGNTWQLEGGEGGFVGAGDCFSWPGLAISTPVNGLK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2573 229 MobiDBLite consensus disorder prediction 1 30 - -
Mtr8g2573 229 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Mtr8g2573 229 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 2 226 - -
Mtr8g2573 229 Pfam Dof domain, zinc finger 27 83 IPR003851 GO:0003677|GO:0006355
Mtr8g2573 229 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Mtr8g2573 229 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 226 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2573 Mtr-Chr8 36211707 36213055 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2573 1 229 C2C2-Dof Transcription Factor Family AT3G50410 47.674 7.57e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr8g2573 zf-Dof 9.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2573 - - cam:101488684 353.599