Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2444 ATGGAAACTACCTCGTTTTCCAAATGGATGTTCACATTCTGCTTTGTTTTATGTTTGGTCTCACAATTCATTCACTCTAGTGTTACATATGATAGAAAAGCAATTCTCATCAATGGACAAAGAAGAATTCTTTTTTCTGGTTCTATACATTATCCTAGAAGTACTCCTGATATGTGGGAAGATCTGATTCAAAAGGCTAAAGAAGGAGGTCTTGATGTGATTGAAACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTGGCAATTACAATTTTGAAGGAAGATATGATCTAGTGAAATTCATAAAGACAGTTCAAAAAGCAGGACTTTATGCTCATCTTCGCATTGGACCTTATGTTTGTGCTGAATGGAATTTTGGAGGATTTCCAGTTTGGCTGAAGTATGTTCCAGGCATAAGCTTTAGAACAGACAATGAACCTTTCAAGAGGGAAATGCAAAGGTTCACTGAGAAGATTGTAGGATTGATGAAGAGTGAACAGCTCTTTGAATCACAGGGTGGCCCTATCATTCTCTCTCAGATTGAAAATGAGTATGGAGCACAAAGTAAGTTACAGGGTACTGTTGGCCAAAATTATGTGAATTGGGCAGCCAAAATGGCTGTAGAGATGGGAACTGGAGTTCCTTGGGTGATGTGCAAGGAAGATGATGCACCAGATCCAGTAATAAACACATGTAATGGCTTCTATTGTGACAAGTTTACTCCAAATAGACCCTATAAGCCTACAATGTGGACTGAAGCTTGGAGTGGCTGGTTTACAGAATTCGGAGGTCCAATTCACAAAAGACCTGTACAAGATTTAGCATTTGCAGTTGCTCAATTTGTAACAAGAGGAGGGTCATTTGTAAACTACTACATGTATCATGGAGGAACCAATTTTGGACGAACCGCAGGAGGCCCTTTTATATCTACTAGTTATGACTATGATGCTCCACTAGATGAATATGGTTTGATTAGGCAGCCAAAATATGGTCATCTGAAGGAGCTTCATAGAGCTATCAAGATGTGCGAGCGAGCTTTGGTTTCAACCGACCCAATTGTTACTTCATTAGGGAGCTCCCAACAGGCTCATGTATACTCTACGGAATCCGGAGATTGTGCTGCTTTTCTCTCAAACTACGACTCAAAATCCGCTGCTAGAGTGCTGTTCAATAATATGCACTATAGTTTACCTCCTTGGTCCATCAGCATCCTTCCCGATTGTAGAAATTCGGTCTTTAATACAGCAAAAGTCGGAGTGCAAACATCTCAAATGCAAATGTTACCAACAAATACTCATATGTTCTCATGGGAGAGTTTTGATGAAGATACTACTTCTCTGGATGATAGCTTCACACTCACTGCTCCTGGTCTCTTGGAACAGATAAATGTAACACGAGATGCAAGTGATTATCTTTGGTATATAACTAGTGTTGATATAGGTTCGTCCGAACACTTTCTGCATGGAGGTGAACTCCCAACTCTTATTGTTCAGTCCAAAGGCCATGCTGTGCATGTTTTCATCAATGGTCAACTTTCTGGTACTACCTATGGAACAAGGGAGTATAGGAGATTCATGCATACCGGCAAGGTAAAGCTTCGCGCCGGAACAAACAGAATAGCTCTGCTCAGTGTTGCCGTCGGACTTCCTAATGTAGGAGAACATTTTGAGACGTGGAGCACAGGAATCCTAGGTCCGGTTGCACTCCATGGACTCAACCGGGGAAATTGGGACTTGTCCCAACAGAAATGGACTTATCAGGTTGGACTGAAAGGAGAGGCCATGAATCTTGCATCTCCTAATAGTATCTCATCTGTTGAGTGGATGCAGTCGGCAATAGTTGTACAAAGAAATCAACCATTGACATGGCACAGGACTAATTTCGATGCACCTGAAGGAGACGAACCACTGGCATTAGATATGGAGGGTATGGGTAAAGGTCAAATATGGATTAATGGACAGAGTATTGGAAGATACTGGACGATATTCGCTAATGGTAATTGCAACGACTGTAACTATGCCGGGTCGTTTAGACCTCAGAAGTGCCAGCTCGGTTGTGGCCAACCGACCCAACGATGGTACCATGTCCCTCGATCATGGTTGAAGCCAACTCAAAACCTATTGGTTATTTTTGAGGAACTTGGTGGAGATCCTTCAAAGATTTCACTTGTAAAGAGATCAGTGGGCAGTGTCTGCGCTGATGTGTCTGAGTACCACACAAATATTAAGAATTGGCACATTGACAGCTACGGTAAGTCCGAAGAATTCCGTGCACCAAAGGTTCACTTGCAATGTAGCCCTGGCCAGACCATCTCTTCAATTAAATTCGCAAGCTTTGGAACTCCTCTTGGGACTTGCGGTAATTACGAGCAAGGAGCTTGTCATTCCCCTACATCCTATGCCACTTTAGAGAAGAGATGTGTAGGGAAGCCAAGATGCATAGTTGCTGTATCAAACAGCAATTTTGGGCAAGACCCTTGTCCGAGGGTGATGAAGCGGTTATCAGTTGAAGCTATTTGCACTCCTGCTACTACAAATTGGAGGGGTTGA 2550 0.4243 METTSFSKWMFTFCFVLCLVSQFIHSSVTYDRKAILINGQRRILFSGSIHYPRSTPDMWEDLIQKAKEGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVKFIKTVQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKREMQRFTEKIVGLMKSEQLFESQGGPIILSQIENEYGAQSKLQGTVGQNYVNWAAKMAVEMGTGVPWVMCKEDDAPDPVINTCNGFYCDKFTPNRPYKPTMWTEAWSGWFTEFGGPIHKRPVQDLAFAVAQFVTRGGSFVNYYMYHGGTNFGRTAGGPFISTSYDYDAPLDEYGLIRQPKYGHLKELHRAIKMCERALVSTDPIVTSLGSSQQAHVYSTESGDCAAFLSNYDSKSAARVLFNNMHYSLPPWSISILPDCRNSVFNTAKVGVQTSQMQMLPTNTHMFSWESFDEDTTSLDDSFTLTAPGLLEQINVTRDASDYLWYITSVDIGSSEHFLHGGELPTLIVQSKGHAVHVFINGQLSGTTYGTREYRRFMHTGKVKLRAGTNRIALLSVAVGLPNVGEHFETWSTGILGPVALHGLNRGNWDLSQQKWTYQVGLKGEAMNLASPNSISSVEWMQSAIVVQRNQPLTWHRTNFDAPEGDEPLALDMEGMGKGQIWINGQSIGRYWTIFANGNCNDCNYAGSFRPQKCQLGCGQPTQRWYHVPRSWLKPTQNLLVIFEELGGDPSKISLVKRSVGSVCADVSEYHTNIKNWHIDSYGKSEEFRAPKVHLQCSPGQTISSIKFASFGTPLGTCGNYEQGACHSPTSYATLEKRCVGKPRCIVAVSNSNFGQDPCPRVMKRLSVEAICTPATTNWRG* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2444 849 SUPERFAMILY Galactose-binding domain-like 583 747 IPR008979 -
Mtr8g2444 849 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Mtr8g2444 849 PANTHER BETA-GALACTOSIDASE 3 5 836 - -
Mtr8g2444 849 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Mtr8g2444 849 Gene3D - 438 581 - -
Mtr8g2444 849 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Mtr8g2444 849 Pfam Galactose binding lectin domain 763 840 IPR000922 GO:0030246
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 PANTHER BETA-GALACTOSIDASE RELATED 5 836 IPR001944 GO:0004553|GO:0005975
Mtr8g2444 849 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Mtr8g2444 849 ProSiteProfiles SUEL-type lectin domain profile. 759 841 IPR000922 GO:0030246
Mtr8g2444 849 Gene3D - 753 847 IPR043159 -
Mtr8g2444 849 Gene3D Glycosidases 24 344 - -
Mtr8g2444 849 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Mtr8g2444 849 Gene3D - 590 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2444 Mtr-Chr8 34897789 34903543 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0660 1 7414430 7419487 Mtr8g2444 8 34897789 34903543 ECH
Mtr3g4221 3 56066124 56072131 Mtr8g2444 8 34897789 34903543 ECH
Mtr8g2444 8 34897789 34903543 Mtr8g2444 8 34897789 34903543 ECH