Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1608 ATGTCAGGTTCGAAATTGGTGAATTATATTATCTTGTGTTCATTTCTGGCTTTGAATTTCTTTCTTCAAGAGTTTGGATCCAAAGCTCAACTCATACCACAAGATGAAGTGAAATCTCTACAAGCAATATCGGATAAACTAAAGAACGTGAATTGGAAAGTCACAGAACGTTCCTGCATTGATGATGGAGGTTTTAATAATGATTATATTGCAGATGATGACATTGTGAGGAAAGTCACATGCGATTGCACTTTCCAAAATAACACCATTTGCCATATTACTAGCATCATGCTAAAAGGTCAAAATATAGCTGGAGTTATGCCTAGTGAATTTGGAAATCTTACTCAGTTGAAAGTACTTGATCTCACTCGCAACTATCTCAATGGCACAATTCCAACGAGTTTTCCTAGCAATTCGCTAGTTGTTTTGTCGCTTTTGGGAAACCGATTAAGTGGTCCAATTCCCACAGAAATTGGTGATATTTCTAGCTTGGAGGAACTGGTCTTAGAAAGTAATCAACTAGGCGGACCGCTTCCTCGTAGTCTCGGAAATTTGATCAAGTTGAAGAGACTGCTCCTTTCTTCGAATAACTTTACTGGGATAATACCAGATTCATTTAGCAAACTAAACAATCTCACTGATTTTAGGATAGATGGAAGCAATTTATCTGGACAGATACCTAGTTTTATCGGGAACTGGACCAAACTTGAGAGATTGAATATGCAGGGTACATCTATGGATGGTCCAATTCCTCCCACCATATCGGAGTTGGAACTTTTGACTGAGTTGAGAATAAGTGATTTGAATGGACCAACCATGACATTTCCTAATCTGAAGGGTTTGAAAAACTTGCAACTACTGGAGTTGAGAAATTGCTTAATCACAGGTCCTATTCCTGATTACATTGGTGAAATGACAGACTTAATTACTTTAGATCTAAGCTTCAATATGTTGAATGGTTCAATCCCAAATTCAATTCAAGGATTGAAAAGGCTAGATTACATGTTTCTGACTAATAATTCTTTGAATGGACCGATTCAAGACTGGATACTGAACTTCAAAATTAACATAGATTTATCTGACAACAATTTTACAAAGTCTTCTGCAACTAGCTGCCAGCAGTTGAATCTGAACATGGCTTCGAGCCATTCGTCTTCAGCGGTCACTTCACCTTCAACGTTTTGTTTGAAGAGGAACCTTCCTTGTACAAGAAAACCCCAGTATAATTCATTGTTCATAAATTGTGGAGGACCTCAAGGGGATTACGATGGAAATAACTATTTCGGCGATCTGCAGAGAGATGGAATTTCAAATTTTGTTCTTAGAAATGAAGGACATTGGGCTTATAGCAGTACAGGAGTGTATATGGGAAATGTCCATGCAGATTATACTGCATTAAATACATTACCTTTGAATATTACTGGCCCAGAATACTATGAAACCGCGCGGCTTGCTCCTCTGTCACTTAAATACTATGGCCTATGTATGCAGAAGGGAAATTATAAAGTGAAACTCCATTTTGCTGAGATAATGTTTTCTGCTGACCAGACTTTTCAAAGTCTTGGAAAGCGCATATTTGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATCATGGAAGAAGCCGGTGGAGTTGGAAAGGGCATTACTAAGGAATTTGATGTCGAAGTGAATGACACGACCTTGGAAATTCACTTATACTGGGCAGGGAAAGGAACCACTGCCATTCCTGACAGAGGTGTTTATGGACCTCTTATATCTGCTATCACAATAACACCTAACTTTAAAAATCACTCAGAAGGGCTGTCTGCTGGAGTTATCGTTGGAATTGTGGCTGCAGCATGTGTGCTTCTCATGCTTATATTGGTTACCCTTTGGAAGATGGGTATCCTTGGTGAAAAAGATACAAGAGACCAAGAGCTTCTTGATCTGAAAACAGGTTATTTCAGCTTAAGACAAATTAAAGCAGCCACTAATGACTTTGATCCTGCAAATAAGATTGGTGAAGGGGGATTTGGGCCAGTATACAAGGGTGTGTTATCAAATGGCGATGTCATTGCTATTAAGCAGCTCTCCTCAAAATCAAACCAAGGGAATCGCGAATTTGTTAACGAAATCGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGCTGTTGCATTGAAGGAAAGCAGTTGCTGCTGATATATGAATACATGGAGAACAATTGTCTTGGCCGTGCACTTTTTGGTCATCGACAACAGAAGCTGCACTTGGACTGGCCTACAAGAATGAAGATCTGTCTTGGTATAGCAAAGGGGTTAGCTTATCTTCATGAGGAATCAACATTGAAAATAGTACACAGGGATATTAAGCCAACTAACGTATTACTTGACAAGGATCTTAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTAATGAAGACGGGAATACCCATATCAGTACACGAATAGCTGGAACAATTGGCTACATGGCTCCAGAATATGCCATGCGGGGGTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTGCCGGAAAAAGCAACACAAATTTCCAACCAATGGAGGAGTTTGTATATCTTCTTGATTGGGCCTATGATCTCAAAGATCAAGGAAACCTCCTGGAGTTGGTGGATCCAAGTCTTGGTTCAAGGTACTCGAAAAAGGAAGCCATGAGAATGCTGAACTTAGCATTGTTATGCACCAACACATCTCCCGGTCCTAGACCATCCATGTCATTGGTAGTAAGCATGCTTGAAGGAAAAACTCCAATTCAAGCACCAGTAATCAACCGCGGTGAGAGCGGACAACACGTAAGATTCAAAGCCTCCGGATTGCAGTCACAAAACAGCCAACCTCTTGATTCTTCTACATTCTCACATGGAAGCAAAAGACAAGTATCAGTTCACTCCTCCACATCTCTTCAATGTGAAGATGATTTTTCATCAAGCAGTAAAAGTCCTTGA 3015 0.3944 MSGSKLVNYIILCSFLALNFFLQEFGSKAQLIPQDEVKSLQAISDKLKNVNWKVTERSCIDDGGFNNDYIADDDIVRKVTCDCTFQNNTICHITSIMLKGQNIAGVMPSEFGNLTQLKVLDLTRNYLNGTIPTSFPSNSLVVLSLLGNRLSGPIPTEIGDISSLEELVLESNQLGGPLPRSLGNLIKLKRLLLSSNNFTGIIPDSFSKLNNLTDFRIDGSNLSGQIPSFIGNWTKLERLNMQGTSMDGPIPPTISELELLTELRISDLNGPTMTFPNLKGLKNLQLLELRNCLITGPIPDYIGEMTDLITLDLSFNMLNGSIPNSIQGLKRLDYMFLTNNSLNGPIQDWILNFKINIDLSDNNFTKSSATSCQQLNLNMASSHSSSAVTSPSTFCLKRNLPCTRKPQYNSLFINCGGPQGDYDGNNYFGDLQRDGISNFVLRNEGHWAYSSTGVYMGNVHADYTALNTLPLNITGPEYYETARLAPLSLKYYGLCMQKGNYKVKLHFAEIMFSADQTFQSLGKRIFDVSIQGFKYLKDFNIMEEAGGVGKGITKEFDVEVNDTTLEIHLYWAGKGTTAIPDRGVYGPLISAITITPNFKNHSEGLSAGVIVGIVAAACVLLMLILVTLWKMGILGEKDTRDQELLDLKTGYFSLRQIKAATNDFDPANKIGEGGFGPVYKGVLSNGDVIAIKQLSSKSNQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLIYEYMENNCLGRALFGHRQQKLHLDWPTRMKICLGIAKGLAYLHEESTLKIVHRDIKPTNVLLDKDLNAKISDFGLAKLNEDGNTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVAGKSNTNFQPMEEFVYLLDWAYDLKDQGNLLELVDPSLGSRYSKKEAMRMLNLALLCTNTSPGPRPSMSLVVSMLEGKTPIQAPVINRGESGQHVRFKASGLQSQNSQPLDSSTFSHGSKRQVSVHSSTSLQCEDDFSSSSKSP* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1608 1004 Pfam Protein tyrosine and serine/threonine kinase 668 934 IPR001245 GO:0004672|GO:0006468
Mtr8g1608 1004 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Mtr8g1608 1004 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Mtr8g1608 1004 Pfam Leucine Rich Repeat 116 140 IPR001611 GO:0005515
Mtr8g1608 1004 Gene3D Ribonuclease Inhibitor 81 247 IPR032675 -
Mtr8g1608 1004 Gene3D Transferase(Phosphotransferase) domain 1 740 944 - -
Mtr8g1608 1004 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 981 - -
Mtr8g1608 1004 Gene3D Ribonuclease Inhibitor 248 406 IPR032675 -
Mtr8g1608 1004 MobiDBLite consensus disorder prediction 959 1004 - -
Mtr8g1608 1004 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1608 1004 PANTHER - 71 981 - -
Mtr8g1608 1004 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1608 1004 SUPERFAMILY L domain-like 83 371 - -
Mtr8g1608 1004 Gene3D - 409 598 - -
Mtr8g1608 1004 CDD STKc_IRAK 670 937 - -
Mtr8g1608 1004 SUPERFAMILY Protein kinase-like (PK-like) 649 940 IPR011009 -
Mtr8g1608 1004 Pfam Malectin domain 410 592 IPR021720 -
Mtr8g1608 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Mtr8g1608 1004 Gene3D Phosphorylase Kinase; domain 1 630 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1608 Mtr-Chr8 23480101 23493247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1608 10 1002 Receptor kinase-like Gene Family AT1G53440 59.127 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1608 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1608 8 23480101 23493247 Mtr8g1608 8 23480101 23493247 ECH