Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1586 ATGGAACCGGACCCGGCCCAGTTTCACCACACCACAATCGGGTCATTTCTGTCATCTTTACCACCTCTCCAAACCAAACCCTATCATCCATCGTTTTCTTCCGGATCGGACCCTTCCATCTCTTCTCTCTCAATTGAGTGTGCTCTCAACTCTCAAGCCTATGCGATGGAAATATCAAATGATTCAGAAGCTAAGAAACCAAAAAGGTTGACATCTGTTGTTTGGAATCACTTTGAAAGGATAAAAAAAGCTGACATATGTTATGCTGTTTGCGTGCATTGCAACAAGAGACTTAGTGGATCAAGTAATAGTGGAACTACTCATCTAAGAAATCACTTGTTGCGGTGTCTGAAAAGATCAAACTTTGACGTTTCTCAACTACTTGCAGTAAAGAGAAAGAAAAAAGATACTACCGTCGGCCTAGCAAACATTAGTTTTGATGAAGGTCAGAGGAAAGAAGAATGTATAAAGCCAACGTTCGCCAAGTTTGAACAGGAACATAAGAAAGATGAAATCATTAACTTTGTAAGTAGTAAATTTGACCAGGAGAGGAGTCAACATGATCTTGCTCGCATGATCATATTACATGGATACCCGGTCACCTTGGCTGAACAAGTAGGGTTCAAGGTCTTTGTGAAGAATCTCCAGCCTCTCTTTGAGTTTTCGCCAAACAGCGGCGTAGAGATTTCTTGTATAGAAATCTACAGGAGGGAGAAAGAGAAAGTGTTTGAGATGATAAGCAAATTATGTGGCAGGATTAATCTCTCTATCGAAATGTGGTCTTCGGCAGAAAATACCTCGTATTTGTGTCTATCTGCGCATTATATTGATGAGAATTGGACACTGCAGAAGAAAGTTTTGAACTTTCTTACACTTCACTCTTCTTACACTGAAGACTTGCTTCCAGAAGTGATTATCAAAAGTCTCGATGAATGGGATATTGACTGCAAACTATTTGCATTGACTCTTGATGATTGTTCCGTTGATGATAGCATCACTTTACGAATCAAAGAGCGTGTTTCTGAGAAAAGGCCTTTCTTAAGTACTCGACAAATACTCGACGTGCGCTCTGCAGCACATCTCATAACTTCTATTGTTCAAGATGCCATGGATGCATTACATGAGGTGATCCAAAAGATTCGAGAGAGCATTAGATACATTAAAAGTTCACAAGAAGTGCAAGGAAAATTTAATGAAATTTCTCAAAGTGCTGGGATCAACTTTCAGAAGGCCTTATTTCTTGATAATCCACTTCAGTGGAAGTCCACATTTATCATGCTTGAAACTGCACTAGAATACAGGAGTGCGTTTTCACTCCTCCAAGAACATGATACCTCCTACTCATCAACTCTATCCGACGAAGAGTGGGAATGGGCTAGTTCTGTTGCTGGATATTTAAAACTCCTAGTTGAAATTATGAATATCTTCTCAGGCAACAGATTTCCTACATCTAATATATTCTTCCCTGAGATATGTGACATTCATATTCAATTAATTGACTGGAGCAGAAGTTCCGACCATTTTCTTAGACTCATGGCTTTGAAGATGAAATCCAAATTTGATAAGTACTGGAGCAAGTGCAGTTTGGCTTTAGCTTTAGCAGCAGTCCTAGACCCTCGGTTTAAATTGAAGTTGGTTGAGTACTACTACTCGCTCATATATGGAAGCACTGCTTTAGAACGCATCAAAGAAGTTTCTGATGGTATCAAAGAACTTTTTAATGCATATTCTATATGTTCAACAATGGTTGATCAAGGGTCAGCTTTGCCTGGAAGTAGCTTACCAAGTACCAGTTCTGGTGCCAGGGATAGGCTAAAAGGTTTTGACAGATTCCTTCATGAGACATCTCAGAGTCAGTCCATGACATCAGACTTGGACAAGTATTTGGAGGAACCGATCTTTCCTCGTAATTCTGATTTTAACATACTGAACTGGTGGAAAGTCCACACGCCGAGGTACCCTATTTTGTCTATGATGGCACGAGATGTTCTCGGGACTCCAATGTCAACTTTAGCACCTGAGTTGGCCTTTAACACAGGGGGCAGACTGCTCGATTCTTCTCGCAGTTCACTGAACCCAGATACACGAGAAGCTTTAATATGCACACACGATTGGCTCCGAAATGAATCAGAAGGTTTAAACTCGTCCCCAATCCAATCTATTCCACCCATTCTTCTTGAATCAAGTTAA 2190 0.4041 MEPDPAQFHHTTIGSFLSSLPPLQTKPYHPSFSSGSDPSISSLSIECALNSQAYAMEISNDSEAKKPKRLTSVVWNHFERIKKADICYAVCVHCNKRLSGSSNSGTTHLRNHLLRCLKRSNFDVSQLLAVKRKKKDTTVGLANISFDEGQRKEECIKPTFAKFEQEHKKDEIINFVSSKFDQERSQHDLARMIILHGYPVTLAEQVGFKVFVKNLQPLFEFSPNSGVEISCIEIYRREKEKVFEMISKLCGRINLSIEMWSSAENTSYLCLSAHYIDENWTLQKKVLNFLTLHSSYTEDLLPEVIIKSLDEWDIDCKLFALTLDDCSVDDSITLRIKERVSEKRPFLSTRQILDVRSAAHLITSIVQDAMDALHEVIQKIRESIRYIKSSQEVQGKFNEISQSAGINFQKALFLDNPLQWKSTFIMLETALEYRSAFSLLQEHDTSYSSTLSDEEWEWASSVAGYLKLLVEIMNIFSGNRFPTSNIFFPEICDIHIQLIDWSRSSDHFLRLMALKMKSKFDKYWSKCSLALALAAVLDPRFKLKLVEYYYSLIYGSTALERIKEVSDGIKELFNAYSICSTMVDQGSALPGSSLPSTSSGARDRLKGFDRFLHETSQSQSMTSDLDKYLEEPIFPRNSDFNILNWWKVHTPRYPILSMMARDVLGTPMSTLAPELAFNTGGRLLDSSRSSLNPDTREALICTHDWLRNESEGLNSSPIQSIPPILLESS* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1586 729 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 61 710 - -
Mtr8g1586 729 SUPERFAMILY Ribonuclease H-like 240 708 IPR012337 -
Mtr8g1586 729 Pfam BED zinc finger 72 115 IPR003656 GO:0003677
Mtr8g1586 729 SUPERFAMILY beta-beta-alpha zinc fingers 72 119 IPR036236 -
Mtr8g1586 729 Pfam Domain of unknown function (DUF4413) 477 576 IPR025525 GO:0003677
Mtr8g1586 729 SMART bed5 69 119 - -
Mtr8g1586 729 PANTHER BED FINGER-RELATED 61 710 IPR045259 -
Mtr8g1586 729 Pfam hAT family C-terminal dimerisation region 624 706 IPR008906 GO:0046983
Mtr8g1586 729 ProSiteProfiles Zinc finger BED-type profile. 69 124 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1586 Mtr-Chr8 22722155 22726612 Dispersed/Transposed