LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1565	ATGGGTAATGATGAAATAAGAAGAAGAAACAAAGGGTACTGTGAGCTGAAGGATTTGTGTTTGGATTTTGATGAATATGATGGAACTTTCTCTTTCTGCTTTTGGATTTATCTCATCAAATCAACTACATTCCCTGCCACCATTCTTCATCAGATTCACTCTGACATTTCCGAAAGTGCTCCTTTTCTCGTTATTAACGATAATAAGAGAATCAATGTTTTGCCTGTTCTTTACTTACATGAAGAAGCTCCTGTTACTTGCATGGGTCCTTGGACAGAAGTTCCACATGTTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTGAGGTTTGTCCAAATTATATTCGGCTTCACATTAATGGGGAGATTGTAGGAGAAAAGTCACTGTCTTCCTTATTACATAAGGAATCCAATTCAAGTAATTTGAAGGAAATACATTTGGCCAATCTTTGTGGAGACAGTAGTGATGTGCAGGGTTATGTGCACAATTATGAAGGATTCCATACTTTTTCTTCTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAGTTATCAATAGATGAATCATCCATCTCTGAGGTTGAAGAAGAAAGTGATGGTGTTTGGGGCATTGTTGGTGGTAAAGCATCTTGTCGCAGGAATGTCTCTTTAGACGTTGTTTTATCAGATGCATTTGGACAGCCTGTTGATATGGAGAATGAGGTTTTTGCTTCACTTGTGTATGCTGACACGGGGGCTCCAGTTGAGAATACAACTGATGACGAAGCACCCCTTTTGTCTAGCTATGATGGAATTGAATTTTCTTCTTGTGAAAGGCCTAGTAAATTTTTGTTGGGTCGTGCATCATTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAGCAGGTTGTTCCTCATCAGATTTTGTGTTCCAAAATTAGGAGATTATCCTTTCCTTCAGACAAACACCCGTCCGATTCGATGCATCTCCAGGAGCCGTAACACAAAATTATCCACGCTGGTGTGGAAAAAGTCAACTTATGCTCTTGAAAGACTCAATTTGTCCCAATCTTCAGCAATTGATGACGTGTCATTGGAAAGTATGAATTCTGGTCACGAAGAAAAAACCAACCCACTGATGAAGAGGTTTAGAGTTGGACTTGACAAGATATCTGTATCAGTTAAGGCCAACCCCACCTTAAAGCAATCTGGTGTAGAATGTAGTAATTCTCATGTATGGACTGCTAATCAGGTTGAGAAGGGGTTTCCAAAAAGCTTGGATGGCAGATCTCTTAACTTTGAAGAAGCAGATGTCTCTCCATCTGAATCATCAGAGAGTACAGGGGAGAGATATTCACCTTCAAATAGCCTGGAAAGTAGAAGATATCAAATATCGGATATGACCATTTTCAAATACTGTCTGGCAGGCTTGGCCGAGAGATCTCAGATGCTTAAAGAAATTGCCATCTCTGCTTCAGACAGAGAAATTTCAGAGCTGGCTCATAGTGTTTCACACTTTTCAGGATGTTCCCACCATGGAAACCAAATATTAATTTCCAAGAGATTGATAGAAGATGGAACTAATCTTTGGTTGGCAATGTCTCCAAACAACCACCCCATTCCTTGGAAGAGCGCTGTGTATGAGGTTGAAGAGCAGTTCATGAAGATTGCTTCTTGTGGGTCAAGATCTCTCTCTCAGCAGGACATTGAGATTCTAAGAAGCATTGCGGGATGTCAAGAGTATCTATCACTAGAGAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTAGCGTGTGTAATATCCAGGGACTGGGTAAATGCTATCTGGAATTCCATGTCACCTAAATGGATTGAAGGATTCATCACCAAGGAGGAGGCAGAAGCTTCACTTCAAGGTCCTGGAGGATTTCAAGAACGTGGTACTTTTATACTTCGGTTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCCGGTTGCCTAATTGTTACATATGTTGGGAATGACTACAAACTTCGCCACAAACTACTTTCGATGGATCATATATATGGCTCTGATAATCAAAGAATAGATGCAAAACCATTGCAAGATATGCTACTGGCAGAACCTGAGCTGTCCCGTTTGGGAAGGATAATGAGAAGTTATTAA	2151	0.4063	MGNDEIRRRNKGYCELKDLCLDFDEYDGTFSFCFWIYLIKSTTFPATILHQIHSDISESAPFLVINDNKRINVLPVLYLHEEAPVTCMGPWTEVPHVTVDFEFPLEKWVHVGCEVCPNYIRLHINGEIVGEKSLSSLLHKESNSSNLKEIHLANLCGDSSDVQGYVHNYEGFHTFSSIKDHHLKDPPLKLSIDESSISEVEEESDGVWGIVGGKASCRRNVSLDVVLSDAFGQPVDMENEVFASLVYADTGAPVENTTDDEAPLLSSYDGIEFSSCERPSKFLLGRASFKLRISQLSSKCDSRLFLIRFCVPKLGDYPFLQTNTRPIRCISRSRNTKLSTLVWKKSTYALERLNLSQSSAIDDVSLESMNSGHEEKTNPLMKRFRVGLDKISVSVKANPTLKQSGVECSNSHVWTANQVEKGFPKSLDGRSLNFEEADVSPSESSESTGERYSPSNSLESRRYQISDMTIFKYCLAGLAERSQMLKEIAISASDREISELAHSVSHFSGCSHHGNQILISKRLIEDGTNLWLAMSPNNHPIPWKSAVYEVEEQFMKIASCGSRSLSQQDIEILRSIAGCQEYLSLENFEKLWCWLYPVACVISRDWVNAIWNSMSPKWIEGFITKEEAEASLQGPGGFQERGTFILRFPTSRSWPHPDAGCLIVTYVGNDYKLRHKLLSMDHIYGSDNQRIDAKPLQDMLLAEPELSRLGRIMRSY*	717

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1565	716	PANTHER	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	4	711	IPR001217	GO:0003700\|GO:0006355\|GO:0007165
	Mtr8g1565	716	MobiDBLite	consensus disorder prediction	434	458	-	-
	Mtr8g1565	716	MobiDBLite	consensus disorder prediction	437	458	-	-
	Mtr8g1565	716	PANTHER	SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR	4	711	-	-
	Mtr8g1565	716	SUPERFAMILY	SH2 domain	611	685	IPR036860	-
	Mtr8g1565	716	SUPERFAMILY	Concanavalin A-like lectins/glucanases	23	143	IPR013320	-
	Mtr8g1565	716	Gene3D	SH2 domain	605	713	IPR036860	-
	Mtr8g1565	716	ProSiteProfiles	Src homology 2 (SH2) domain profile.	618	716	IPR000980	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	STAT	Mtr8g1565		None	None	None

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr8g1565	8	21617820	21633176	Mtr8g1565	8	21617820	21633176	ECH