Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1524 ATGAAGAAAATTAATCTATTACTAAGAAAGTGCAAGAGCTTGTCAAAGCAATTAGGAAGATCATCATCATATAGTAGCTTAAGGTCAAAATCAAATAGAGAAGATTTATATGAAGAGCATGGTATGCAAGAAGATGAAAATTGTGAAACTATATTTGTTGGTAGCTCAAGGAAACGGTATGTGATAAGTTCAAAGTATTTGAATCATCCTCTTCTTGAAGCTTTGATCAACAAGTCTAAGCAAAAGGGTAGTGATAATGAAAATGTTTTGGTTGTTAATTGTGAGGTTGTTCTCTTTGATCATTTGTTATGGATGTTAGAAAATGCTGATCCTAAGTTTAGTTCTGAATCTTTAGAGGAATTGGCTGAACTTTATGTGTTCTAA 384 0.3177 MKKINLLLRKCKSLSKQLGRSSSYSSLRSKSNREDLYEEHGMQEDENCETIFVGSSRKRYVISSKYLNHPLLEALINKSKQKGSDNENVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1524 127 Pfam Auxin responsive protein 11 106 IPR003676 GO:0009733
Mtr8g1524 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 127 IPR003676 GO:0009733
Mtr8g1524 127 PANTHER EXPRESSED PROTEIN 3 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1524 Mtr-Chr8 20297211 20298027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1524 50 108 Calmodulin-binding Proteins AT5G20810 35.000 4.37e-08 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1524 8 20297211 20298027 Mtr8g1524 8 20297211 20298027 ECH