Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1520 ATGATAAGTTTCGAAATAAAGAAACAAGTTGTATTGATATACTTATGGTTGTGGTGGAGTACTACTACTAGTATTTGTGGTAATGCAACGAAAGATAGTTTGAAGCCAGGTGATACATTGAATTCCAATTCCACGCTATGTTCTAAACAAGACAAGTATTGTCTATGTCTCAACAGTTCTATTGGTCACTTGATTATACGTACTCTCGATGGCGCAGTAGTGTGGATGTATGATAGAAATCAACCCATAGACATAGATTCATCAGTTCTTCTATCATTAGACTACTCTGGTGTGCTCAAAATAGAATTTCAAAATAGGAATTTACCAATAATCATTTACTCTTCGCCTCAACCAACCAACGACACTGTGGCCACTATGTTAGACACCGGTAACTTTGTGCTTCAACAACTTCACCCAAATGGGACAAAGAGTATATTATGGCAGAGTTTTGATTATCCAACATACATTTTGATCTCAACGATGAAGTTGGGAGTTAATCGAAAAACAGGACATAATTGGTCATTGGTTTCATGGTTGACTCCTTCGCTACCAACTCCAGGTAAATTTAGTCTTGTATGGGAACCAAAAGAACGTGAATTGAACATAAGGAAAAGCGGCAAAGTGCATTGGAAAAGCGGAAAACTTAAAAGCAATGGAATATTCGAGAACATTCCCACAAAAGTTCAACGTATATATCAGTACATTATTGTCTCTAACAAGAATGAAGATTCTTTCGCTTTCGAAGTTAAAGATGGGAAGTTTGCACGATGGCAACTAACCTCGAAGGGGAGGTTAGTAGGTCATGATGGAGAGATTGGGAATGCAGATATGTGTTATGGATATAATAGCAATGGAGGGTGCCAAAAATGGGAGGAAATACCAAATTGTAGGGAAAATGGTGAGGTTTTTCAGAAAATTGCGGGAACACCAAACGTAGACAATGCAACAACGTTTGAACAGGATGTGACTTATAGTTACAGTGATTGCAAGATTAGATGTTGGAGAAATTGTAATTGCAATGGATTCCAGGAATTTTATGGTAATGGGACTGGATGTATATTCTATTCATGGAATTCGACACAAGATGTTGATTTGGTGAGTCAGAATAACTTCTACGTCTTGGTAAACTCTACAAAATCAGCCCCAAATTCCCATGGTAGAAAAAAGTGGATATGGATCGGTGTTGCAACCGCAACTGCTTTACTCATATTATGCTCACTTATTCTATGCCTAGCAAAAAAGAAACAAAAATATGCACTACAAGATAAGAAAAGTAAAAGAAAGGATTTGGCGGATTCGACTGAATCCTATAATATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGTTTTTAACTATACATCAATTTTGGAAGCAACTATGGACTTTTCACCTGAAAACAAGTTAGGACAGGGAGGCTATGGACCTGTTTATAAGGGAGTCTTGGCAACAGGACAAGAAGTTGCTGTAAAAAGACTTTCAAAAACATCCGGACAAGGAATTATGGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAACACAAAAATCTTGTAGAACTACTTGGCTGTTGCATTCATGAAGAAGAAAGGATTCTGATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTGTTTGATTGTACGAAAAAGAATCTGCTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTGCTCAAGGATTGCTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAAGCCAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGAATGTTTACGCAGCAGGAGTCCGTAGTAAATACCAACAGAATTGTTGGGACGTATGGATACATGTCTCCAGAATATGCCATGGAAGGAATATGTTCAACAAAGTCTGACGTCTATAGTTTTGGAGTGTTGCTACTTGAAATTATTTGTGGGAGAAAAAACAATAGCTTTTATGATGTTGATCGTCCACTAAATCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATGGATCCAACATTAAATGACACATTTGTTCCTGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATAATCGACCTACAATGTCTGAAGTTATATCAGTGTTGACAAACAAATATGAACTCACAAACTTGCCAAGAAGGCCAGCATTTTATGTTAGAAGAGAGATCTTTGAGGGGGAAACAACTTCTAAAGGGCAAGACACCGACACCTATTCTACGACAGCAATTTCTACCTCATGTGAAGTAGAAGGGAAAATATAA 2367 0.368 MISFEIKKQVVLIYLWLWWSTTTSICGNATKDSLKPGDTLNSNSTLCSKQDKYCLCLNSSIGHLIIRTLDGAVVWMYDRNQPIDIDSSVLLSLDYSGVLKIEFQNRNLPIIIYSSPQPTNDTVATMLDTGNFVLQQLHPNGTKSILWQSFDYPTYILISTMKLGVNRKTGHNWSLVSWLTPSLPTPGKFSLVWEPKERELNIRKSGKVHWKSGKLKSNGIFENIPTKVQRIYQYIIVSNKNEDSFAFEVKDGKFARWQLTSKGRLVGHDGEIGNADMCYGYNSNGGCQKWEEIPNCRENGEVFQKIAGTPNVDNATTFEQDVTYSYSDCKIRCWRNCNCNGFQEFYGNGTGCIFYSWNSTQDVDLVSQNNFYVLVNSTKSAPNSHGRKKWIWIGVATATALLILCSLILCLAKKKQKYALQDKKSKRKDLADSTESYNIKDLEDDFKGHDIKVFNYTSILEATMDFSPENKLGQGGYGPVYKGVLATGQEVAVKRLSKTSGQGIMEFKNELVLICELQHKNLVELLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKNLLDWKKRFNIIEGIAQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQQESVVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIICGRKNNSFYDVDRPLNLIGHAWELWNDGEYLKLMDPTLNDTFVPDEVKRCIHVGLLCVEQYANNRPTMSEVISVLTNKYELTNLPRRPAFYVRREIFEGETTSKGQDTDTYSTTAISTSCEVEGKI* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1520 788 SMART serkin_6 466 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1520 788 Pfam D-mannose binding lectin 73 178 IPR001480 -
Mtr8g1520 788 Gene3D Phosphorylase Kinase; domain 1 423 541 - -
Mtr8g1520 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Mtr8g1520 788 CDD STKc_IRAK 472 739 - -
Mtr8g1520 788 ProSiteProfiles Bulb-type lectin domain profile. 31 147 IPR001480 -
Mtr8g1520 788 Gene3D Transferase(Phosphotransferase) domain 1 542 747 - -
Mtr8g1520 788 Pfam PAN-like domain 296 355 IPR003609 -
Mtr8g1520 788 ProSiteProfiles PAN/Apple domain profile. 296 378 IPR003609 -
Mtr8g1520 788 SUPERFAMILY Protein kinase-like (PK-like) 451 756 IPR011009 -
Mtr8g1520 788 Pfam Protein tyrosine and serine/threonine kinase 469 736 IPR001245 GO:0004672|GO:0006468
Mtr8g1520 788 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 774 - -
Mtr8g1520 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Mtr8g1520 788 PIRSF SRK 5 279 IPR024171 GO:0004674
Mtr8g1520 788 PIRSF SRK 273 786 IPR024171 GO:0004674
Mtr8g1520 788 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 774 - -
Mtr8g1520 788 Gene3D - 26 150 IPR036426 -
Mtr8g1520 788 ProSiteProfiles Protein kinase domain profile. 466 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1520 Mtr-Chr8 20185583 20190665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1520 454 752 Receptor kinase-like Gene Family AT4G11530 59.667 1.42e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1520 PK_Tyr_Ser-Thr 1.3e-48 CL0016