Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1519 ATGATAAGCTTTGAAATCAAGAAACAAGTTGTATTGATATACTTATGGTTGTGGTGGATTACTTCTACTAACATTTGTGTTAATGCAACAAATGATAGTTTGAAGCCAGGTGATACATTGAATTCCAAATCCAAGCTATGTTCTAAACAAGGCAAGTTTTGTCTTCAATTTAGCAATAATTCCATTGGTTCTGATTTCCCATGCTTGTTTATAAGTGTTAATGTTGATTATGGCACAGTAGTGTGGATGTATGATATAAATCATTCCATTGACTTTAATACATCAGTTTTATTACTAGACTACTCTGGTGTGCTCAAAATAGAATCTCAAAATAGGAAATTACCAATAATCATTTACTCTTCACCTCAACCTACCAACAACACTATGGCCACTATTTTAGACACGGGTAACTTTGTGCTTCAACAACTTCACCCAAATGGGACAAAGAGTATATTATGGCAGAGTTTCGATTATCCCACAGACGTATTGATCCCAATGATGAAGTTGGGAGTTAATCGAAAAACTGGACATAAATGGTCATTGGTTTCAGATAAATTTAATCTTGAATGGGGACCAAAAGAAGGAGAATTGAACATCAAGAAAAGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCAATGGATTATTCGAGAATATTCCGGCCAATGTTCAAAATAGGTATCAGTACATTATTGTCTCTAACAAGGATGAAGATTCTTTCACGTTCGAAGTTAAAGATGGGAAGTTTGCACAATGGGAACTAATCTCGAAAGGGAGGTTAGTAGGTGATGATGGATATATTGCTAATGCAGATATGTGTTACGGATATAGTGATGGAGGATGCCAAAAATGGGAGGATATACCAACTTGCAGGGAACCTGGTGAGGTGTTTCAGAAAAAGGCGGGAAGACCAAGCATTGACAATTCAACAACGTTTGAAGAGGATGTGACTTATAGTTACAGTGATTGCAAGATGAGATGTTGGAAAAATTGTAATTGCAGTGCATTCCAAGAATATTATGATAATGGGACTGGATGTGTATTCCATTCATGGAATTCGACACAATATGTTCAGGTGGTTGCGGATACCTTTTACAACTTGGTAAAGCCAACAAAATCAGCTCCGAATTCCCATGGTGTTAAAAGGTGGATATGGATAGTTTCTGCAATCACAATTGCTTTACTCATATTATGCCCACTCATTTTATGCCAAGCCAAAAAGAAAAAAAAACATGCACTACAAGATAAGAAAAGTAAAAGAAAGGAAGGTAAGAGCATTGATTTGGTCGAATACTATGATATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTGCATCAATCTTGGAAGCAACTATGGACTTTTCCCCTGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTGGCAACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCGAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAGCACACAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCTAACAAAAGCTTGGATTTCTACCTATTTGATTGTACAAAAAAGAAGTTTCTAAATTGGAAAACACGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATTATTCACAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATGGCAAGAATGTTTACACAACAGGAATCCACAGTAAATACCAACCGGATTGTTGGGACTTATGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAATAATAGCTTCTATGATGATGATCGTCCACTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGCATCTACAGTTACTGGATCCATCTTTAAGTGACACATTTGTTCCTTATGAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACATTATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTAACAAACAAATATGAACTCACAACCTTACCAAGAAGACCAGCATTCTATGTTAGAAGAAATATCTTTGAGGGGGAAACAACTTCCAAAGGGAAAGACACCGACACCTATTCTACGACAACAATTTCTTCCTCATGTGAAGTAGAAGGGAAAATATAA 2358 0.3601 MISFEIKKQVVLIYLWLWWITSTNICVNATNDSLKPGDTLNSKSKLCSKQGKFCLQFSNNSIGSDFPCLFISVNVDYGTVVWMYDINHSIDFNTSVLLLDYSGVLKIESQNRKLPIIIYSSPQPTNNTMATILDTGNFVLQQLHPNGTKSILWQSFDYPTDVLIPMMKLGVNRKTGHKWSLVSDKFNLEWGPKEGELNIKKSGKVYWKSGKLKSNGLFENIPANVQNRYQYIIVSNKDEDSFTFEVKDGKFAQWELISKGRLVGDDGYIANADMCYGYSDGGCQKWEDIPTCREPGEVFQKKAGRPSIDNSTTFEEDVTYSYSDCKMRCWKNCNCSAFQEYYDNGTGCVFHSWNSTQYVQVVADTFYNLVKPTKSAPNSHGVKRWIWIVSAITIALLILCPLILCQAKKKKKHALQDKKSKRKEGKSIDLVEYYDIKDLEDDFKGHDIKVFNFASILEATMDFSPENKLGQGGYGPVYKGILATGQEVAVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKKFLNWKTRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGVCSTKSDVYSFGVLLLEIVCGRKNNSFYDDDRPLNLIGHAWELWNDGEHLQLLDPSLSDTFVPYEVQRCIHVGLLCVEHYANDRPTMSDVISMLTNKYELTTLPRRPAFYVRRNIFEGETTSKGKDTDTYSTTTISSSCEVEGKI* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1519 785 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Mtr8g1519 785 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 772 - -
Mtr8g1519 785 PIRSF SRK 5 263 IPR024171 GO:0004674
Mtr8g1519 785 PIRSF SRK 267 782 IPR024171 GO:0004674
Mtr8g1519 785 Gene3D Phosphorylase Kinase; domain 1 426 538 - -
Mtr8g1519 785 Pfam D-mannose binding lectin 79 185 IPR001480 -
Mtr8g1519 785 Gene3D Transferase(Phosphotransferase) domain 1 539 743 - -
Mtr8g1519 785 Pfam Protein tyrosine and serine/threonine kinase 466 733 IPR001245 GO:0004672|GO:0006468
Mtr8g1519 785 ProSiteProfiles Protein kinase domain profile. 463 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1519 785 CDD STKc_IRAK 469 736 - -
Mtr8g1519 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 772 - -
Mtr8g1519 785 SUPERFAMILY Protein kinase-like (PK-like) 449 754 IPR011009 -
Mtr8g1519 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 183 IPR036426 -
Mtr8g1519 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Mtr8g1519 785 ProSiteProfiles PAN/Apple domain profile. 292 374 IPR003609 -
Mtr8g1519 785 SMART serkin_6 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1519 785 Gene3D - 25 156 IPR036426 -
Mtr8g1519 785 Pfam PAN-like domain 317 350 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1519 Mtr-Chr8 20164010 20168710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1519 451 749 Receptor kinase-like Gene Family AT4G11530 59.000 2.45e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1519 PK_Tyr_Ser-Thr 8.8e-48 CL0016