Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1518 ATGATAAGCTTGGAAATAAAGAAACAAGTTGTATTGATATACTTATGGTTGTGGTGGATTACTACTGCTAATATTTGTGTTGAAGCAAAACGTGATAGTTTGAAGCCAGGTGATACATTGAATTCCAATTCCACGCTATGTTCTAAACAAGGCAAGTTTTGTCTTCGATTCGACATTACTTCTAATTCTGAATTTCATAGCTTGTTTATAGGTGTTAATGCTGATTCTGGCCCAATAGTGTGGATGTATGATATAAATCATTCCATTGACTTAAATTCAGCAGTTCTATCATTAGACTACTCTGGTGTGCTCAAAATAGAATCACAAAATAGGAAACCAATAATCATTTACTCTTCACCTCAACCCATAAACAACACTATGGCCACTATATTAGACACAGGTAACTTTGTGCTTCGACAATTTCATCCCAATGGCTCAATGAGTGTGTTGTGGCAGAGTTTTGATTATCCCGATGACACTTTGGTTCCAACGATGAAGTTAGGCGTTAATCGGAAAACAGGACATAATTGGTCATTGGTTTCAGGTGAATTTAATCTAGATTGGGAACCAAAACAAGGTGAATTGATCATCAAGAAAAGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCAATGGATTATTCGAGAATATTCCGGTGAATGTTCAACATATGTATCAGTACATTATTGTCTCTAACAAAGACGAAGATTCTTTCACTTTCAAAACCAAAGATAAGGATTATAAGACGTTACCATGGTGGACATTGTTACCATCGGGGAGGTTAATGGGTAATGAAGGAGATATTGTAAATGCAGATATGTGTTATGGATATAATAGTGATGGAGGATGCCAAAAATGGGAGGATATACCAACTTGTAGGGCACCTGGTGAGGGGTTTCAGAAAAAGGCGGGAAGACCAAACATAGACAATTCAACAACGTATGAATTCGATGTGACTTATAGTTACAGTGATTGCAAGATGAAATGTTGGAAAAATTGTAGTTGCAATGGATTCCAACTATATTATAGTAATATGACTGGATGTGTATTCCTTTCATGGAATTCGACACAATATGTTGACGTGCTTCCGGATACCTTTTACACCTTGGTAAAGACAACAAAATCAGCTCCGAATTCCCATGTCAATGCAGGTATAAAATGGTGGATATGGATATGTGCTGCAATTGCAACTACTTTACTCATATTATGCCCACTCATTATATGGCTAGCCAAAAAGAAAAAAAAATATGCACTTCAAGTTAAGAAAAGTAAAAGAAAGGAAGGTAAGAACATTGATTTGGTGGAATCCTATGATATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATATTGGAAGCAACTATGGACTTTTCCCATGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTGGCCACAGGGCAAGAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAGCACAAAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTGATCTATGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTGTACAAAAAAGAAGTTCCTAGATTGGAAAAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCAAGACTCAAAATAATTCACAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGAATGTTTACACAGCAGGAGTCTGTAGTAAATACAAATAGAATTGTTGGGACATATGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTTTATGATGGTGATCGTCCACTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATGGATCCAACGTTAAATGACACATTTGTTCCGGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTAACAAACAAATATGAACTCACAACAATACCCAGAAGACCAGCATTTTATGTTAGAAGAGACATTCTTGATGGAGAAACAACTTCTAAAGTGCCAGACATCTACACCTATTCTACAACAATTTCTTCCTCGTGTGAAGTAGAAGGGAAAGTATAA 2370 0.3582 MISLEIKKQVVLIYLWLWWITTANICVEAKRDSLKPGDTLNSNSTLCSKQGKFCLRFDITSNSEFHSLFIGVNADSGPIVWMYDINHSIDLNSAVLSLDYSGVLKIESQNRKPIIIYSSPQPINNTMATILDTGNFVLRQFHPNGSMSVLWQSFDYPDDTLVPTMKLGVNRKTGHNWSLVSGEFNLDWEPKQGELIIKKSGKVYWKSGKLKSNGLFENIPVNVQHMYQYIIVSNKDEDSFTFKTKDKDYKTLPWWTLLPSGRLMGNEGDIVNADMCYGYNSDGGCQKWEDIPTCRAPGEGFQKKAGRPNIDNSTTYEFDVTYSYSDCKMKCWKNCSCNGFQLYYSNMTGCVFLSWNSTQYVDVLPDTFYTLVKTTKSAPNSHVNAGIKWWIWICAAIATTLLILCPLIIWLAKKKKKYALQVKKSKRKEGKNIDLVESYDIKDLEDDFKGHDIKVFNFTSILEATMDFSHENKLGQGGYGPVYKGILATGQEVAVKRLSKTSGQGIVEFKNELVLICELQHKNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKKFLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQQESVVNTNRIVGTYGYMSPEYAMEGVCSTKSDVYSFGVLLLEIVCGRKNNSFYDGDRPLNLIGHAWELWNDGEYLKLMDPTLNDTFVPDEVKRCIHVGLLCVEQYANDRPTMSDVISMLTNKYELTTIPRRPAFYVRRDILDGETTSKVPDIYTYSTTISSSCEVEGKV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1518 789 ProSiteProfiles PAN/Apple domain profile. 294 376 IPR003609 -
Mtr8g1518 789 ProSiteProfiles Bulb-type lectin domain profile. 31 151 IPR001480 -
Mtr8g1518 789 Gene3D Transferase(Phosphotransferase) domain 1 544 749 - -
Mtr8g1518 789 Gene3D Phosphorylase Kinase; domain 1 433 543 - -
Mtr8g1518 789 ProSiteProfiles Protein kinase domain profile. 468 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1518 789 SMART blect_4 37 157 IPR001480 -
Mtr8g1518 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Mtr8g1518 789 Gene3D - 25 154 IPR036426 -
Mtr8g1518 789 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 780 - -
Mtr8g1518 789 Pfam Protein tyrosine and serine/threonine kinase 470 739 IPR001245 GO:0004672|GO:0006468
Mtr8g1518 789 SMART serkin_6 468 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1518 789 SUPERFAMILY Protein kinase-like (PK-like) 453 759 IPR011009 -
Mtr8g1518 789 PIRSF SRK 267 785 IPR024171 GO:0004674
Mtr8g1518 789 PIRSF SRK 4 267 IPR024171 GO:0004674
Mtr8g1518 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 181 IPR036426 -
Mtr8g1518 789 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 780 - -
Mtr8g1518 789 CDD STKc_IRAK 474 741 - -
Mtr8g1518 789 Pfam D-mannose binding lectin 79 181 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1518 Mtr-Chr8 20149011 20154559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1518 418 757 Receptor kinase-like Gene Family AT3G45860 53.216 3.09e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1518 PK_Tyr_Ser-Thr 2.7e-48 CL0016