Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1517 ATGATGATAAGCTTTGAAATAAAGAAACAAGTTGTATTGATATACCTATGGTTGTGGTGGAACACTACTGCTAATATTTGTGTTGAAGCAACAAGTGATAGTTTGAAGCCAGGTGATAAATTGAATTACAAATCCAAGCTATGTTCTAAACAAGGCAAGTTTTGTCTTCAATTCGGCAATAATTCTAATTCTGATTTCCAATGCTTGTTTATAAGTGTTAATGCTGATTATGGCAAAGTAGTGTGGGTGTATGATATAAATCATTCCATTGACTTTAATACATCAGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATCTCAAAATAGGAAACCAATAATCATTTACTCTTCACCTCAACCTACCAACAACACTGTGGCCACTATGTTAGACGCCGGTAACTTTGTGCTTCAACAATTTCTTCCCAACGGCTCAATGAGTGTGTTGTGGCAGAGTTTTGATTATCCATCAGACGTTTTGATCCCAATGATGAAGTTAGGCGTTAATCGAAAAACAGGACATAATTGGTCATTGGTTTCAGATAAATTTAATCTTGAATGGGAACCAAAACAAGGTGAATTGAACATCAAGAAAAGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCAATGGATTATTCGAGAATATTCCGGCCAATGTTCAAAGTAGGTATCAGTACATTATTGTCTCTAACAAGGATGAAGATTCTTTCACGTTCGAAGTTAAAGATGGGAAGTTTGCACAATGGGAACTATCCTCGAAGGGGAAGTTAGTAGGTGATGATGGATATATTGCTAATGCAGATATGTGTTACGGATATAATAGTGATGGAGGGTGCCAAAAATGGGAGGATATACCAACTTGCAGGGAACCTGGTGAGATGTTTCAGAAAAAGGCGGGAAGACCAAGCATAGACAATTCAACAACATATGAATTCGACGTGACTTATAGTTACAGTGATTGCAAGATCAGATGTTGGAAAAATTGTAGTTGCAATGGATTCCAACTATATTATAGTAATATGACTGGATGTGTATTCCTTTCATGGAATTCGACACAATATGTTGACATGGTTCCGGATAAATTTTACACCTTGGTAAAGACAACAAAATCAGCTCCGAATTCCCATGGTATAAAAAGGTGGATATGGATAGGTGCTGCAATTACAACTGCTTTACTCATATTATGCCCACTCATTATATGGCTAGCCAAAAAGAAAAAAAAATATGCACTTCCAGATAAGAAAAGTAAAAGAAAGGAAGGTAAGAGCAATGATTTGGTGGAATCATATGATATCAAAGATCTTGAAGACGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATCTTGGAAGCAACTATGGAATTTTCCCCTGAAAACAAGTTAGGACAGGGAGGTTATGGACCCGTTTATAAGGGAATCTTGGCAACAGGGCAAGAAATTGCTGTAAAAAGGCTTTCGAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGTTACTTATATGTGAACTTCAGCACAAAAATCTTGTCCAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTACCTATTTGATTGTACAAAAAAGATGTTGCTAGATTGGAAGAAGCGTTTCAACATAATCGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGGATGTTTACACAACTGGAATCCACAGTAAATACCAACCGGATTGTTGGGACTTATGGTTACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGATGCTTGAAATTGTTTGTGGAAGAAAAAATAATAGCTTTTATGATGATGATCGTCCACTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATGGATCCAACGTTAAATGACACATTTGTTCCGGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATAGCAATGTTAACAAACAAATATGAACTCACAACAATACCCAGAAGACCAGCATTTTATGTTAGAAGAGACATTCTTGATGGAGAAACAACTTCTAAAGTGCCAGACACCGACACCTATTCTACAACAATTTCTACCTCGTGTGAAGTAGAAGGGAAAGTATAA 2355 0.3622 MMISFEIKKQVVLIYLWLWWNTTANICVEATSDSLKPGDKLNYKSKLCSKQGKFCLQFGNNSNSDFQCLFISVNADYGKVVWVYDINHSIDFNTSVLSLDYSGVLKIESQNRKPIIIYSSPQPTNNTVATMLDAGNFVLQQFLPNGSMSVLWQSFDYPSDVLIPMMKLGVNRKTGHNWSLVSDKFNLEWEPKQGELNIKKSGKVYWKSGKLKSNGLFENIPANVQSRYQYIIVSNKDEDSFTFEVKDGKFAQWELSSKGKLVGDDGYIANADMCYGYNSDGGCQKWEDIPTCREPGEMFQKKAGRPSIDNSTTYEFDVTYSYSDCKIRCWKNCSCNGFQLYYSNMTGCVFLSWNSTQYVDMVPDKFYTLVKTTKSAPNSHGIKRWIWIGAAITTALLILCPLIIWLAKKKKKYALPDKKSKRKEGKSNDLVESYDIKDLEDDFKGHDIKVFNFTSILEATMEFSPENKLGQGGYGPVYKGILATGQEIAVKRLSKTSGQGIVEFKNELLLICELQHKNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKMLLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQLESTVNTNRIVGTYGYMSPEYAMEGVCSTKSDVYSFGVLMLEIVCGRKNNSFYDDDRPLNLIGHAWELWNDGEYLKLMDPTLNDTFVPDEVKRCIHVGLLCVEQYANDRPTMSDVIAMLTNKYELTTIPRRPAFYVRRDILDGETTSKVPDTDTYSTTISTSCEVEGKV* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1517 784 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Mtr8g1517 784 SUPERFAMILY Protein kinase-like (PK-like) 449 754 IPR011009 -
Mtr8g1517 784 Gene3D Transferase(Phosphotransferase) domain 1 539 744 - -
Mtr8g1517 784 CDD STKc_IRAK 469 736 - -
Mtr8g1517 784 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 775 - -
Mtr8g1517 784 Gene3D Phosphorylase Kinase; domain 1 427 538 - -
Mtr8g1517 784 SMART serkin_6 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1517 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Mtr8g1517 784 PIRSF SRK 266 783 IPR024171 GO:0004674
Mtr8g1517 784 PIRSF SRK 5 263 IPR024171 GO:0004674
Mtr8g1517 784 ProSiteProfiles Protein kinase domain profile. 463 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1517 784 Pfam D-mannose binding lectin 80 184 IPR001480 -
Mtr8g1517 784 Pfam Protein tyrosine and serine/threonine kinase 466 733 IPR001245 GO:0004672|GO:0006468
Mtr8g1517 784 Gene3D - 26 155 IPR036426 -
Mtr8g1517 784 ProSiteProfiles PAN/Apple domain profile. 292 374 IPR003609 -
Mtr8g1517 784 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 775 - -
Mtr8g1517 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 182 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1517 Mtr-Chr8 20114943 20121235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1517 451 749 Receptor kinase-like Gene Family AT4G11530 59.667 6.74e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1517 PK_Tyr_Ser-Thr 6.7e-47 CL0016