Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1516 ATGATGATAAGCTTTGAAATAAAGAAACAAGTTGTATTGATATACCTATGGTTGTGGTGGAACACTACTGCTAATATTTGTGTTGAAGCAACAAGTGATAGTTTGAAGCCAGGTGATAAATTTGATGCAAATTCCACGCTATATTCAAAACAAGGCAAGTTTGCTCTATTTTTCGATCAAACATTAGCTAGCGAAGATGCTCACTTGGTTATAAGTGTTAATGCAGATTATGGCATTCAGGTGTGGATGTATGATAGAAATCATTCCATTGACTTAGATTCAGCAGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATCACAAAATAGGAAACCAATAATCATTTACTCTTCACCTCAACCAATAAACAACACTTTGGCCACTATATTAGACACAGGTAACTTTGTGCTTCAACAATTTCATCCCAATGGGTCAAAGACTGTTTTGTGGCAGAGTTTTGATTATCCATCAGACGTTTTGATCCCAACGATGAAGTTAGGCGTTAATCGAAAAACAGGATATAATTGGTCATTGGTGTCCTGGTTGACTCCTTCGCGGACAACTTCAGGTGAATTTAGTCTTGAGTGGGAACCAAAACAAGGTGAACTGAACATCAAGAAAAGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCAATGGATTATTCGAGAATATTCCGGCCAATGTTCAAAATATGTATCGGTACATCATTGTCTCTAACAAGGATGAAGATTCCTTTAGTTTTGAAATTAAAGATCGGAATTATAAGAATATTTCAGGGTGGACACTAGACTGGGCGGGGATGCTAACGAGTGATGAAGGGACTTATATTGGAAATGCAGATATATGTTATGGATATAATAGTGATCGAGGGTGCCAAAAATGGGAGGATATACCAGCTTGCAGGGAACCTGGTGAGGTGTTTCAAAGAAAGACTGGAAGACCAAACATAGACAATGCATCAACCATTGAACAGGATGTGACTTATGTTTACAGTGATTGCAAGATAAGATGTTGGAGAAATTGTAATTGCAATGGATTCCAAGAATTTTATCGCAATGGGACTGGATGTATATTCTATTCATGGAATTCGACACAAGATCTTGATTTGGTGAGTCAGGATAACTTTTACGCCTTGGTAAACTCTACAAAATCAACCCGAAATTCCCATGCAAATGCAGGTAAAAAAAAGTGGATATGGATAGGTGTTGCAATCGGAACTGCTTTACTCATATTATGCCCACTCATTATATGGCTAGCCAAAAAGAAACAAAAATATTCACTTCAAGATAGGAAAAGTAAAAGACATAAGGGTCAGAGCAAAGGTTTGGCGGATTCTAATGAATCTTATGATATCAAAGATCTTGAAGATGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATCTTGGAAGCAACTATGGAATTTTCCCCTGAAAACAAGTTAGGACAGGGAGGTTATGGACCCGTTTATAAGGGAATCTTGGCAACAGGGCAAGAAATTGCTGTAAAAAGGCTTTCGAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTTATTGAACTTCAGCACACAAATCTTGTCCAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTATGAATATATGCCAAACAAAAGCTTGGATTTCTACCTATTTGATTGTACAAAAAAGAAATTTCTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTATTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGGATGTTTACACAACTGGAATCCACAGTAAATACCAACCGGATTGTTGGGACTTATGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTCCAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGAAAAAATAATAGCTTTTATGATGCTGATCGCCCACTAAATCTAATCGGACATGCATGGGAGATATGGAATGATGGTGAGTATCTACGGTTACTGGATCCATCTTTAAGTGACACATTTGTTCCTGATGAAGTACAAAGGTGTATTCACGTTGGTCTCTTGTGTGTAGAACAATATGCAAATGATCGACCTACAATGTCGGATGTGATATCAATGTTAGCAAACAAATATGAACTCACAACCTTACCAAGAAGACCAGCATTTTATATTAGACGAGAGATCTTTGAAGGGGAAACAACTTCCAAAGGGGAAGACGCCATCACCTATTCTACGACAACAATTTCTACCTCATGTGAAGTAGAAGGGAAAATAAGATTGGCTAAGATTGAGCTACTAACCGGTAACATTTTCTTCAATGTTACTAATACTACTCTCAAAGTATTTCTCTTCTTTTTGAAACAATATTCATCAATGATGATAAGTTTTGAAATAAAGAAACAAGTTGTATTGATATACCTATGGTTGTGGTGGAACACGACTAGCATTTGTGTTAAAGCAATAAATGATAGTTTGAAGCCAGGTGATAAATTGGATGCAAATTCCAACCTATGTTCTAAACAAGGTAAGTATTGTGTTCAATTCTCCCCTACTTTACAAAACGAAGATGCTCACTTGATTGTAAGTGTCAATGAGGATTATGGCGCAGTAGTATGGATGTATGATAGAAATCATTCCATTGACTTAGATTCAGCAGTTCTATCGCTAGACTACTCCGGTGTGCTCAAAATAGAATCACAAAGTAGGAAACCAATTATCATTTATTCTTCACCTCAACCCATAAACAACACTTTGGCTACTATATTAGACACAGGTAACTTTGTGCTTCGACAATTTCACCCCAATGGGTCAAAGACTGTGTTGTGGCAGAGTTTTGATTACCCATCAGACGTTTTGATCCCAACGATGAAGTTAGGAGTTAATCGAAAAACAGCACATAATTGGTCATTGGTGTCATGGTTAACTCCTTCGCGGCCAAATTCAGGTAAATTTAGTCTTGAGTGGGAACCAAAACAAGGTGAACTGAACATCAAGAAAAGAGGCAAAGTGTATTGGAAAAGCGGAAAACTTAAAAGCGATGGATTATTCGAGAATATTCCGGCCAATGTTCAAACTATGTATCAATACACTATTGTCTCTAACAAGGATGAAGATTCTTTCACTTTCAAAATCAAAGATCGGAATTATAAGACGTTATCTTCGTGGTATCTGCAATCAACAGGGAAATTAAGTGGTACTGAAGGAGATATTGGAAATGCAGATATGTGTTATGGATATAATAGGGACGGAGGGTGCCAAAAGTGGGAGGATATACCAACTTGTAGGGAACCTGGTGAGGTGTTTCAGAGGAAGACGGGAAGACCAAACATCATCAATGCATCAACTACTGAAGGTGATGTGAATTATGGTTACAGTGATTGCAAGATGAGATGTTGGAGAAATTGTAATTGCTATGGATTCGAAGAACTATACAGTAATTTTACTGGATGTATATACTATTCATGGAATTCGACACAAGACGTGGATTTGGATGATCAAAATAATTTTTACGCCTTGGTAAAGCCATCAAAACCAGCCCAAAAATCCCATGTCGATGCAGGTAAAAAGTGGATATGGATAGGTGCTGCAATCGCATCTGCTATACTCATATTATGTCCACTCGTTTTATGCCTAGTAAAAAAGATTCAAAAATATGCTCTACAAGTAGATAAGAAAAGTAAAAGAAAGGCGGGTAAGAGCAATGATTTGGCGGACTCCATTGAATCCTATGATGTTAAAGATCTTGAAGCTGACTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATTTTGGAAGCAACTATGGACTTTTCCCCTGAAAACAAGTTAGGACAGGGAGGCTATGGACCAGTTTATAAGGGAATCTTGGCAACAGGGCAAGAAGTTGCCATAAAAAGACTTTCAAAAACATCTGGACAAGGAATTATGGAATTCAAAAATGAATTGGTACTTATATGTGAACTTCAGCACATAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATCTATAAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTGTACAAAAAAGAAGTTGCTAGATTGGAAAAAGCGTTTCAACGTAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCTAGACTCAAAATCATTCATCGAGACTTGAAAGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTGCTGATTTTGGTATGGCAAGAATGTTTACACAGCAGGAGTCTGTAGTAAATACCAATAGAATTGTTGGGACATATGGATACATGTCTCCAGAATATGCCATGGAAGGAGTTTGTTCTACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTTGTGGAAGGAAAAACAATAGCTTTTATGATGTTGATCGCCCCTTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTAAAGCTAATGGATCCAACGTTAAATGACACATTTGTTCCGGATGAAGTGAAAAGGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATGATCGACCTACAATGTCTGATGTTATATCAATGTTAACAAACAAATATGAACTCACAACAATACCTAGAAGACCAGCATTTTATGTTAGAAGAGACATTCTTGATAGAGAAACAACTTCTAAAGTGCCAGACACCGACACCTATTCTACAACAATTTCTACCTCGTGTGAAGTAGAAGGGAAAATATAA 4917 0.3667 MMISFEIKKQVVLIYLWLWWNTTANICVEATSDSLKPGDKFDANSTLYSKQGKFALFFDQTLASEDAHLVISVNADYGIQVWMYDRNHSIDLDSAVLSLDYSGVLKIESQNRKPIIIYSSPQPINNTLATILDTGNFVLQQFHPNGSKTVLWQSFDYPSDVLIPTMKLGVNRKTGYNWSLVSWLTPSRTTSGEFSLEWEPKQGELNIKKSGKVYWKSGKLKSNGLFENIPANVQNMYRYIIVSNKDEDSFSFEIKDRNYKNISGWTLDWAGMLTSDEGTYIGNADICYGYNSDRGCQKWEDIPACREPGEVFQRKTGRPNIDNASTIEQDVTYVYSDCKIRCWRNCNCNGFQEFYRNGTGCIFYSWNSTQDLDLVSQDNFYALVNSTKSTRNSHANAGKKKWIWIGVAIGTALLILCPLIIWLAKKKQKYSLQDRKSKRHKGQSKGLADSNESYDIKDLEDDFKGHDIKVFNFTSILEATMEFSPENKLGQGGYGPVYKGILATGQEIAVKRLSKTSGQGIVEFKNELVIELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTKKKFLDWKKRFNIIEGISQGLFYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQLESTVNTNRIVGTYGYMSPEYAMEGVCSPKSDVYSFGVLLLEIVCGRKNNSFYDADRPLNLIGHAWEIWNDGEYLRLLDPSLSDTFVPDEVQRCIHVGLLCVEQYANDRPTMSDVISMLANKYELTTLPRRPAFYIRREIFEGETTSKGEDAITYSTTTISTSCEVEGKIRLAKIELLTGNIFFNVTNTTLKVFLFFLKQYSSMMISFEIKKQVVLIYLWLWWNTTSICVKAINDSLKPGDKLDANSNLCSKQGKYCVQFSPTLQNEDAHLIVSVNEDYGAVVWMYDRNHSIDLDSAVLSLDYSGVLKIESQSRKPIIIYSSPQPINNTLATILDTGNFVLRQFHPNGSKTVLWQSFDYPSDVLIPTMKLGVNRKTAHNWSLVSWLTPSRPNSGKFSLEWEPKQGELNIKKRGKVYWKSGKLKSDGLFENIPANVQTMYQYTIVSNKDEDSFTFKIKDRNYKTLSSWYLQSTGKLSGTEGDIGNADMCYGYNRDGGCQKWEDIPTCREPGEVFQRKTGRPNIINASTTEGDVNYGYSDCKMRCWRNCNCYGFEELYSNFTGCIYYSWNSTQDVDLDDQNNFYALVKPSKPAQKSHVDAGKKWIWIGAAIASAILILCPLVLCLVKKIQKYALQVDKKSKRKAGKSNDLADSIESYDVKDLEADFKGHDIKVFNFTSILEATMDFSPENKLGQGGYGPVYKGILATGQEVAIKRLSKTSGQGIMEFKNELVLICELQHINLVQLLGCCIHEEERILIYKYMPNKSLDFYLFDCTKKKLLDWKKRFNVIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKIADFGMARMFTQQESVVNTNRIVGTYGYMSPEYAMEGVCSTKSDVYSFGVLLLEIVCGRKNNSFYDVDRPLNLIGHAWELWNDGEYLKLMDPTLNDTFVPDEVKRCIHVGLLCVEQYANDRPTMSDVISMLTNKYELTTIPRRPAFYVRRDILDRETTSKVPDTDTYSTTISTSCEVEGKI* 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1516 1638 SUPERFAMILY Protein kinase-like (PK-like) 1303 1610 IPR011009 -
Mtr8g1516 1638 SMART serkin_6 1317 1595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1516 1638 SMART serkin_6 483 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1516 1638 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 186 IPR036426 -
Mtr8g1516 1638 Pfam D-mannose binding lectin 915 1018 IPR001480 -
Mtr8g1516 1638 Pfam D-mannose binding lectin 81 183 IPR001480 -
Mtr8g1516 1638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 845 1629 - -
Mtr8g1516 1638 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 790 - -
Mtr8g1516 1638 ProSiteProfiles Protein kinase domain profile. 483 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1516 1638 Gene3D - 861 990 IPR036426 -
Mtr8g1516 1638 Gene3D - 26 155 IPR036426 -
Mtr8g1516 1638 Pfam Protein tyrosine and serine/threonine kinase 486 751 IPR001245 GO:0004672|GO:0006468
Mtr8g1516 1638 Pfam Protein tyrosine and serine/threonine kinase 1320 1587 IPR001245 GO:0004672|GO:0006468
Mtr8g1516 1638 ProSiteProfiles Bulb-type lectin domain profile. 867 987 IPR001480 -
Mtr8g1516 1638 SUPERFAMILY alpha-D-mannose-specific plant lectins 915 1021 IPR036426 -
Mtr8g1516 1638 CDD STKc_IRAK 1323 1590 - -
Mtr8g1516 1638 Gene3D Transferase(Phosphotransferase) domain 1 557 761 - -
Mtr8g1516 1638 Gene3D Transferase(Phosphotransferase) domain 1 1393 1598 - -
Mtr8g1516 1638 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 845 1629 - -
Mtr8g1516 1638 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 790 - -
Mtr8g1516 1638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1438 1450 IPR008271 GO:0004672|GO:0006468
Mtr8g1516 1638 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Mtr8g1516 1638 SMART blect_4 38 158 IPR001480 -
Mtr8g1516 1638 SMART blect_4 873 993 IPR001480 -
Mtr8g1516 1638 Gene3D Phosphorylase Kinase; domain 1 1279 1392 - -
Mtr8g1516 1638 Gene3D Phosphorylase Kinase; domain 1 446 556 - -
Mtr8g1516 1638 SUPERFAMILY Protein kinase-like (PK-like) 469 772 IPR011009 -
Mtr8g1516 1638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Mtr8g1516 1638 CDD STKc_IRAK 489 752 - -
Mtr8g1516 1638 ProSiteProfiles Protein kinase domain profile. 1317 1603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1516 Mtr-Chr8 20078405 20113280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1516 471 808 Receptor kinase-like Gene Family AT4G11530 54.252 1.68e-111 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1516 PK_Tyr_Ser-Thr 4.1e-46 CL0016