Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1515 ATGATAAGCTTTGAAATAAAGAAACAAGTTGTATTGATATACCTATGGTTGTGGTGGAACACTACTAGCATTTGTGTTAAAGCAACAAATGATAGTTTGAGGCCAGGTGATAAATTGGATGCAAATTCCAACCTATGTTCTAAACAAGGCATGTATTGTCTATATTTCAATAGCGAAGAAGCTCACTTGGTTATAAGTAGTGGTTTTGATGGCCCAGTAGTGTGGATGTATGATAGAAATCAACCCATAGACATATATTCAGCAGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATTTCAAAATAGGAATGTACCGATTATCATTTATTATTTGCCTGAACCAACCAACGACACTGTGGCCACTATGTTAGACACAGGTAACTTTGTGCTTCAACAACTTCACCCAAATGGGACAAAGAGTATACTATGGCAGAGTTTTGACTATCCAACAGATAGTTTGATCCCAACGATGAAGTTAGGTGTTAATCGAAAAACAGGACATAATTGGTCATTGGTTTCACGGTTGGCTCATTCGCGACCAACTTCAGGTGAATTTAGTCTTGAATGGGAACCAAAAGAAGGTGAATTGAACATAAGGAAAAGCGGCAAAGTGCATTGGAAAAGCGGAAAACTTAGAAGTAATGGAATATTCGAGAACATTCCAGCGAAAGTTCAAAGTATATATCGGTACATTATTGTGTCTAACAAGGATGAAGATTCTTTTGCTTTCGAAGTTAATGATGGGAATTTTATACGATGGTTCATATCCCCGAAGGGGAGGTTAATAAGTGATGCTGGAAGCACTGCTAATGCAGACATGTGTTATGGATATAAAAGTGATGAAGGGTGCCAAGTTGCAAACGAAGACATGTGTTATGGATATAATAGCGATGGAGGGTGCCAAAAATGGGAGGAAATACCAAATTGTAGGGAACCTGGTGAGGTTTTTCGGAAAAAGGTGGGAAGACCAAATAAAGACAATGCAACAACTACTGAAGGTGATGTGAATTATGGTTATAGTGATTGCAAGATGAGATGTTGGAGAAATTGTAATTGCTATGGATTCCAAGAATTATACATTAATTTTACTGGATGTATATACTATTCATGGAATTCAACACAAGACGTTGATTTGGACAAAAAGAATAACTTTTACGCCTTGGTAAAGCCAACAAAATCACCTCCGAATTCCCATGTCAATGCAGGTAAGAGGAGGATATGGGTAGGTGCTGCAATCGCAACTTCTTTACTCATATTATGCCCACTCATTTTATGCCTAGCCAAAAAGAAACAAAAATATGCACTACAAGGTAAGAAAAGTAAAAGAAAAGAGGGTAAGAGGAAAGATTTGGCGGAATCCTATGATATCAAAGATCTTGAAAATGACTTCAAAGGACATGATATAAAAGTTTTTAACTTTACATCAATTTTGGAAGCAACTTTGGACTTTTCATCTGAAAACAAGTTAGGACAGGGAGGCTATGGACCCGTTTATAAGGGAATCTTGGCAACAGGACAAGAAGTTGCTGTAAAAAGACTTTCAAAAACATCTGGACAAGGAATTGTGGAATTCAGAAATGAATTGGCATTGATATGTGAACTTCAACACACAAATCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTACGAATATATGCCAAATAAAAGCTTGGATTTCTATCTATTTGATTGTACAAGAAAAAAGTTACTAGACTGGAAGAAGCGCCTGAACATAATCGAAGGAATTTCTCAAGGACTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAGGCTAGCAACATACTCCTTGATGAGAATATGAACCCGAAAATTTCTGATTTCGGTATGGCAAGAATGTTCACGCAACAAGAATCAACAGTTAACACCAATAGGATTGTTGGGACATATGGATACATGTCTCCAGAATATGCAATGGAAGGAATTTGTTCAACAAAGTCTGATGTTTATAGCTTTGGAGTGTTGCTTCTTGAAATTGTTTGTGGAAGAAAAAACAATAGCTTCCATGATGTTGATCGCCCACTAAACCTAATAGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTACAGTTACTGGATCCATCTTTATGTGACACATTTGTTCCTGATGAAGTGAAAAGGTGCATTCACGTTGGTCTCTTATGTGTACAACAATATGCTAATGATCGACCTACAATGTCCGATGTTATATCAATGTTAACAAACAAATATGAACTCACAACTTTACCAAGAAGACCAGCATTCTATATTAGAAGAGAGATCTATGACGGGGAAACAACTTCTAAAGGGCCAGACACCGACACCTATTCTACGACAGCAATTTCTACCTCATGTGAAGTAGAAGGAAAATATAAGTAA 2430 0.3695 MISFEIKKQVVLIYLWLWWNTTSICVKATNDSLRPGDKLDANSNLCSKQGMYCLYFNSEEAHLVISSGFDGPVVWMYDRNQPIDIYSAVLSLDYSGVLKIEFQNRNVPIIIYYLPEPTNDTVATMLDTGNFVLQQLHPNGTKSILWQSFDYPTDSLIPTMKLGVNRKTGHNWSLVSRLAHSRPTSGEFSLEWEPKEGELNIRKSGKVHWKSGKLRSNGIFENIPAKVQSIYRYIIVSNKDEDSFAFEVNDGNFIRWFISPKGRLISDAGSTANADMCYGYKSDEGCQVANEDMCYGYNSDGGCQKWEEIPNCREPGEVFRKKVGRPNKDNATTTEGDVNYGYSDCKMRCWRNCNCYGFQELYINFTGCIYYSWNSTQDVDLDKKNNFYALVKPTKSPPNSHVNAGKRRIWVGAAIATSLLILCPLILCLAKKKQKYALQGKKSKRKEGKRKDLAESYDIKDLENDFKGHDIKVFNFTSILEATLDFSSENKLGQGGYGPVYKGILATGQEVAVKRLSKTSGQGIVEFRNELALICELQHTNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTRKKLLDWKKRLNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESTVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVCGRKNNSFHDVDRPLNLIGHAWELWNDGEYLQLLDPSLCDTFVPDEVKRCIHVGLLCVQQYANDRPTMSDVISMLTNKYELTTLPRRPAFYIRREIYDGETTSKGPDTDTYSTTAISTSCEVEGKYK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1515 809 CDD STKc_IRAK 492 759 - -
Mtr8g1515 809 Gene3D Phosphorylase Kinase; domain 1 447 561 - -
Mtr8g1515 809 PIRSF SRK 284 806 IPR024171 GO:0004674
Mtr8g1515 809 PIRSF SRK 3 313 IPR024171 GO:0004674
Mtr8g1515 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 284 794 - -
Mtr8g1515 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 287 - -
Mtr8g1515 809 Gene3D - 24 150 IPR036426 -
Mtr8g1515 809 Pfam Protein tyrosine and serine/threonine kinase 489 756 IPR001245 GO:0004672|GO:0006468
Mtr8g1515 809 Gene3D Transferase(Phosphotransferase) domain 1 562 766 - -
Mtr8g1515 809 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 287 - -
Mtr8g1515 809 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 284 794 - -
Mtr8g1515 809 SUPERFAMILY Protein kinase-like (PK-like) 472 776 IPR011009 -
Mtr8g1515 809 Pfam D-mannose binding lectin 73 177 IPR001480 -
Mtr8g1515 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Mtr8g1515 809 SMART serkin_6 486 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1515 809 ProSiteProfiles Protein kinase domain profile. 486 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1515 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 174 IPR036426 -
Mtr8g1515 809 ProSiteProfiles Bulb-type lectin domain profile. 30 146 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1515 Mtr-Chr8 20059612 20063262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1515 436 775 Receptor kinase-like Gene Family AT3G45860 54.094 3.41e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1515 PK_Tyr_Ser-Thr 7e-49 CL0016