Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1509 ATGGTGCATTGTAGTGAAAAAGGGAAAACTCAACTTTTTCTTCTCTTCACATACACGTCCTTGTGGTGGTGGTGGTGTACTGGTACTTCTATCAATGTCAGAGCAGCTGAAAATACTGATAGTATGAAGCCAGGAGATAAACTGAATGCCATATCCAAGCTATGTTCAAAACAACATAGTTATTGCATGAGTTTTGACCATGATCCGGATCGTGAAAACCTCACTTATCTAAGCATATTTGGCGAAGGGAGAGATACTTGGTTAGTGTGGATTGCTAACAGAAACCAACCTGCTGACAAAAATTCAGCAGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATCCAAAATTGGTGAACCAATAATCCTGTATTCTTCACCTCAACCTTTTAACAACAGTACTATTGTTGCAACCTTGTTGGATACAGGTAACTTTGTTTTGAAAGATATTCAGAAGAACATTGTGTTGTGGCAAAGTTTTGATCATCCAACCGATAGTTTGCTCCCTAGGATGAAATTAGGTGTAAATCACAAAACTGGTCAAAATTGGTCACTGTTATCAAGAATCAGTGATACAATCCATGCTCCTGGTCCATTCAGGCTTGAATGGGAACCCAACATAAAAGAATTGGTCATCAAGCATAGAGAAAAAGTTTATTGGAGAAGTGGAAAACTGAAAAACAATACATTTGAGTATATATCTGGAAAAGACATTAAAGTCAACGTTGTGTCGAATTAGAATGAAGAGTATTTCTCATACACAACTCAAAATGAAGACAGTCTTACTGTATGGACTCTATTAGAAACTGGGCAACTGATAGACAGGGAAGCAAGTGATCACATAGGAAGGGCTGATATGTGTTATGGGTATAACACGAATGATGGATGCCAAAAATGGGGTGATGCAGAGATACCTACATGCCGGAATCCTGGTGATAAGTTTGATAGCAAGATAGTTTACCCTAATGAAAAAATTGAATACCATATTCTAAATTCTAGCTATGGCATAAGTGATTGCCAAGATATGTGTTGGCGTAACTGCAGCTGCTTTGGATTCGGAAACTTATATAGTAATGGAACTGGTTGTGTAATCTTGGTATCAACTGAAGGTCTTAACATCGCAGGGAGTGGTGATTACAAGTATTACATTCTTGTTAAGAACAACACCGATCACAAAGAAATTAAGTTGATATTGATTTGCGTTGGAATTGGGACTTTTCTACTCATTATCGGTCTTTCCATTCTGTTTCAAGCATTAAGGAAACGAAAATATCTGCTTCAAGAGAGGAAAAGAATAAGAACACAAATTGAGATTCAAGATCTAGAAGGTTCTAGGCAATACTCTGATGGCGATGATCTAGAAGGCGATTTAAGCAATGCAGATGACCTAAAAGTGTTTAGCTATTCATCAATACTTGTGGCTACCAATGGCTTTTCATCAGAAAACAAGTTAGGACAGGGTGGCTTTGGACCTGTTTTTAAGGGAATTCTACCTTCGGGGCAAGAAGTAGCTGTGAAGAAACTTTCAAAAACATCTGGACAAGGAATGATTGAGTTTAGAAATGAATTAACACTCATTTGTAAGCTTCAGCATACAAATCTTGTTCAACTAATCGGTCATTGCATTCATGAACGAGAGAGAATGTTGATCTATGAGTATATGCCAAACAGAAGCTTGGACTTCTTTTTATTTGACTCCACTAGAAGAAAGTTGCTAGATTGGAATAAACGCTTTAGCATAATAGAAGGAATTGCTCAAGGACTACTATACCTTCACAAATACTCAAGACTTCGAATAATCCACAGAGATTTGAAGGCTAGTAATATTCTTCTTGATGAAAATATGAACCCCAAAATTTCTGATTTTGGTGTGGCAAGAATGTTTACAAAACAAGAAACTGAAGCAAATACCAACAGAATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCGATGGAAGGAGTATTTTCTACAAAGTCGGATGTGTACAGCTTTGGAGTGCTGCTCCTTGAAATTATCAATGGTAAAAAAAACAATAGTTTCTACTCTGAAGACAGACCACTTAATCTAGTAGGACATGCATGGGAGCTATGGAAAGAAGGCGTGGTTCTTGAGTTGGTGGATCCATTACTAAATGAGTCCTTTTCGGAGGATGAGGTGCTGAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGTCCCACCATGTGCAATGTTATATCAATGTTAACAAACAAAATTAAAGTGGATGTTTTTGAGGAAGATACGTATGGTGAAGAAGTTGGTGCAGATTCCACGTATGAAAACCCTCATTCACATGTATAA 2349 0.3755 MVHCSEKGKTQLFLLFTYTSLWWWWCTGTSINVRAAENTDSMKPGDKLNAISKLCSKQHSYCMSFDHDPDRENLTYLSIFGEGRDTWLVWIANRNQPADKNSAVLSLDYSGVLKIESKIGEPIILYSSPQPFNNSTIVATLLDTGNFVLKDIQKNIVLWQSFDHPTDSLLPRMKLGVNHKTGQNWSLLSRISDTIHAPGPFRLEWEPNIKELVIKHREKVYWRSGKLKNNTFEYISGKDIKVNVVSN*NEEYFSYTTQNEDSLTVWTLLETGQLIDREASDHIGRADMCYGYNTNDGCQKWGDAEIPTCRNPGDKFDSKIVYPNEKIEYHILNSSYGISDCQDMCWRNCSCFGFGNLYSNGTGCVILVSTEGLNIAGSGDYKYYILVKNNTDHKEIKLILICVGIGTFLLIIGLSILFQALRKRKYLLQERKRIRTQIEIQDLEGSRQYSDGDDLEGDLSNADDLKVFSYSSILVATNGFSSENKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGQGMIEFRNELTLICKLQHTNLVQLIGHCIHERERMLIYEYMPNRSLDFFLFDSTRRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIINGKKNNSFYSEDRPLNLVGHAWELWKEGVVLELVDPLLNESFSEDEVLRCVHAGLLCVEENADDRPTMCNVISMLTNKIKVDVFEEDTYGEEVGADSTYENPHSHV* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1509 781 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 17 766 - -
Mtr8g1509 781 SUPERFAMILY Protein kinase-like (PK-like) 463 754 IPR011009 -
Mtr8g1509 781 ProSiteProfiles Bulb-type lectin domain profile. 39 162 IPR001480 -
Mtr8g1509 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 187 IPR036426 -
Mtr8g1509 781 ProSiteProfiles Protein kinase domain profile. 479 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1509 781 Gene3D Transferase(Phosphotransferase) domain 1 555 766 - -
Mtr8g1509 781 PIRSF SRK 284 779 IPR024171 GO:0004674
Mtr8g1509 781 PIRSF SRK 11 301 IPR024171 GO:0004674
Mtr8g1509 781 CDD STKc_IRAK 485 752 - -
Mtr8g1509 781 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 766 - -
Mtr8g1509 781 Pfam D-mannose binding lectin 88 190 IPR001480 -
Mtr8g1509 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Mtr8g1509 781 SMART serkin_6 479 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1509 781 SMART blect_4 45 165 IPR001480 -
Mtr8g1509 781 Gene3D Phosphorylase Kinase; domain 1 447 554 - -
Mtr8g1509 781 Pfam PAN-like domain 329 365 IPR003609 -
Mtr8g1509 781 Pfam Protein tyrosine and serine/threonine kinase 482 696 IPR001245 GO:0004672|GO:0006468
Mtr8g1509 781 Gene3D - 33 162 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1509 Mtr-Chr8 19904299 19907841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1509 457 751 Receptor kinase-like Gene Family AT3G45860 60.943 5.79e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1509 PK_Tyr_Ser-Thr 1.5e-48 CL0016