Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1508 ATGATAAGCTTTGAAATAAAGAAACAAGTTGTATTGATATACTTATGGTTGTGGTGGAATACAACTGCTACTAATATTTGTGTTAAAGCAACAAGTGATAGTTTGAAGCCAGGTGATACATTGAATTCGAAATCCAAGTTATGTTCTAAACAAGGCAAGTTTTGTCTATATTTCAATCGAACATTAGATAGCGAAGATGCTCACTTGGTCATTGGTATTAATGCCGATTATGGCGCAGTAGTGTGGATGTATGATAGAAATCATTCCATTGACTTAAATTCAGCAGTTCTTTCACTAGATTATTCTGGTGTGCTCAAAATACAATCACAAAATAGGAAACCAATAATCATATGCTCTTCACCTCAACCCATAAACACTTTGGCCACTATATTAGACACAGGTAACTTTGTGCTTCGACAAATTTACCCCAACGGGACAAAGAGTATATTATGGCAGAGTTTTGATTATCCCATAACCACTTTGATCCCAACGATGAAGTTAGGTGTTAACCGAAAAACCGGACATAATTGGTCATTGGTTTCGTGGTTGGCTCCTTCGCTACCGAATTCAGGTGGATTTAGTGTTGAATGGGAACCAATGGAAGGTGAATTGAACATCAAGCAACGCGGCAAAGTGTATTGGAAAAGCGGAAAACTTAACAGCAATGGATTATTCAAGAACATTCTAGTGAAAGTTCAACATGTGTATCAATACATTATTGTCTCTAACAAGGATGAAGACTCCTTCACTTTCGAAATCAAAGATCAGAATTATAAGATGTTCCCAGGGTGGGAACTGTTCTCAACGGGGATGTTAACGAGTAGTGAAGGAGAGATTGCTAACGCAGATATGTGTTATGGCTATAATACCGATGGAGGGTGCCAAAAATGGGAGGATATACCAACCTGCAGGGAACCCGGTGAGGTGTTTAAAAAAATGACAGGCAGACCCAACACCGACAGTGCAACCATCCAAGACAATGTGACTTATGGTTACAGTGATTGTAAGATCAGTTGTTGGAGAAACTGTGAATGCAATGGGTTCCAAGAATTTTATCGTAATGGGACTGGATGTATATTTTATTCATCGAATTCGACACAAGATGTTGATTTGGAGTATTCCAATATCTATAACGTCATGGTAAAGCCAACACTAAATCACCATGGTAAAAGCATGCGGATATGGATTGGTGTTGCAATAGCAGCTGCTATACTCCTATTATGCCCACTTCTTTTATTTGTCGCGAAAAAGAAACAAAAATATGCACGTAAAGATATCAAAAGTAAAAGAGAGGAGAATGAGATGCAAGATTTGGCATCTTCCCATGAATCCTTTGGTGTCAAAGATCTTGAAGATGACTTCAAAGGACATGATATAAAAGTTTTTAACTATTCATCAATTTTGGAAGCAACTATGAACTTTTCACCTGAAAACAAGTTAGGGCAGGGAGGTTATGGACCTGTTTATAAGGGAATTTTGCCAACCGGGCAAGAAATTGCTGTAAAAAGACTTTCAAAGACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTCGTACTTATATGTGAACTTCAGCACACAAATCTTGTCCAACTACTTGGTTGCTGCATTCATCAAGAAGAAAGGATTCTAATATATGAATACATGCCAAACAAAAGCTTGGATTTCTATCTATTTGATTCTACAAGAAGGAAATGTCTAGATTGGAAGAAGCGCTTGAACATAATAGAAGGAATATCTCAAGGATTACTCTATCTTCACAAGTACTCAAGACTCAAAATCATTCATCGAGACTTGAAGGCTAGCAACATACTTCTGGATGAGAATATGAACCCTAAAATTTCTGATTTTGGCATGGCAAGAATGTTCACACAACAAGAATCCGTAGTAAATACCAACAGGATTGTTGGGACATATGGATACATGTCTCCAGAGTATGCCATGGAAGGGATTTGTTCTACTAAGTCTGATGTCTACAGCTTTGGTGTGCTGCTACTTGAAATTATCTGTGGAAGAAGAAACAATAGCTTCTATGATGTTGATCGCCCACTAAATCTAATCGGACATGCATGGGAGCTATGGAATGATGGTGAGTATCTACAATTAATGGATCCAACATTAAATGACACATTTGTTCCTGATGAAGTGCAAAAGTGCATTCATGTTGGTCTCTTATGTGTAGAACAATATGCAAATAATCGACCTACAATGTCTGATGTTATATCAATGTTAACAAACAAATACGCACCGACAACCTTACCAAGAAGACCAGCATTTTATGTTACCAGAGAGATCTTCGAAGGGGAAACAACTTCTAAAGGGCTAGATACTGACACCTATTCTATGACTGCAATTTCTACATCATGTGAAGTAGAAGGGAAAATATAA 2391 0.3747 MISFEIKKQVVLIYLWLWWNTTATNICVKATSDSLKPGDTLNSKSKLCSKQGKFCLYFNRTLDSEDAHLVIGINADYGAVVWMYDRNHSIDLNSAVLSLDYSGVLKIQSQNRKPIIICSSPQPINTLATILDTGNFVLRQIYPNGTKSILWQSFDYPITTLIPTMKLGVNRKTGHNWSLVSWLAPSLPNSGGFSVEWEPMEGELNIKQRGKVYWKSGKLNSNGLFKNILVKVQHVYQYIIVSNKDEDSFTFEIKDQNYKMFPGWELFSTGMLTSSEGEIANADMCYGYNTDGGCQKWEDIPTCREPGEVFKKMTGRPNTDSATIQDNVTYGYSDCKISCWRNCECNGFQEFYRNGTGCIFYSSNSTQDVDLEYSNIYNVMVKPTLNHHGKSMRIWIGVAIAAAILLLCPLLLFVAKKKQKYARKDIKSKREENEMQDLASSHESFGVKDLEDDFKGHDIKVFNYSSILEATMNFSPENKLGQGGYGPVYKGILPTGQEIAVKRLSKTSGQGIVEFKNEFVLICELQHTNLVQLLGCCIHQEERILIYEYMPNKSLDFYLFDSTRRKCLDWKKRLNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTQQESVVNTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIICGRRNNSFYDVDRPLNLIGHAWELWNDGEYLQLMDPTLNDTFVPDEVQKCIHVGLLCVEQYANNRPTMSDVISMLTNKYAPTTLPRRPAFYVTREIFEGETTSKGLDTDTYSMTAISTSCEVEGKI* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1508 796 Gene3D - 26 154 IPR036426 -
Mtr8g1508 796 Gene3D Transferase(Phosphotransferase) domain 1 550 753 - -
Mtr8g1508 796 PIRSF SRK 5 275 IPR024171 GO:0004674
Mtr8g1508 796 PIRSF SRK 275 793 IPR024171 GO:0004674
Mtr8g1508 796 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 781 - -
Mtr8g1508 796 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 781 - -
Mtr8g1508 796 ProSiteProfiles Bulb-type lectin domain profile. 32 151 IPR001480 -
Mtr8g1508 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 182 IPR036426 -
Mtr8g1508 796 Gene3D Phosphorylase Kinase; domain 1 428 549 - -
Mtr8g1508 796 ProSiteProfiles Protein kinase domain profile. 474 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1508 796 Pfam Protein tyrosine and serine/threonine kinase 477 744 IPR001245 GO:0004672|GO:0006468
Mtr8g1508 796 SMART serkin_6 474 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1508 796 ProSiteProfiles PAN/Apple domain profile. 303 384 IPR003609 -
Mtr8g1508 796 Pfam PAN-like domain 312 362 IPR003609 -
Mtr8g1508 796 CDD STKc_IRAK 480 747 - -
Mtr8g1508 796 SUPERFAMILY Protein kinase-like (PK-like) 459 765 IPR011009 -
Mtr8g1508 796 SMART blect_4 38 157 IPR001480 -
Mtr8g1508 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Mtr8g1508 796 Pfam D-mannose binding lectin 80 182 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1508 Mtr-Chr8 19889224 19893190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1508 410 761 Receptor kinase-like Gene Family AT3G45860 51.130 3.90e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1508 PK_Tyr_Ser-Thr 2.2e-47 CL0016