Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1497 ATGGTTTGCACTGAAAAAGGGAAACCTCAAGTGTTGCTTTTCTTCACATACTTGTCCTTATGGTGTAATACTATTTCTACCTATGTCAATGCAGAAAATACTGATAGTATGAAGCCAGGAGATATACTGAATGCCAGTGCCACATCTACGTTGTGTTCTAAACAAGGTAGATATTGCATGAATTTTAACCAAAATACGGATTTTGACAACCTCACTTATCTCAGCATATTTGCCAAAGGGAAAGATAATTGGTTAGTCTGGATCGCTAATAGAGACCAACCTGTTGACATGGATTCTGCAGTGTTATCACTGAACCAATCTGGTGCACTCAAAATAGAATCCAAAATCGGTGAACCAATAATCCTGTATGCTTCACGTCAACATTCTAACAATAGTAGTAATATTGTTGCCACCTTGTTGGATACAGGTAACTTTGTGTTGAAAGATATTCAGAAGAACATTGTTTTGTGGCAAAGTTTTGATCATCCAACCGATAGTTTGCTCCCTGGGATGAAATTAGGTGTGAATCGTAAAACTGGTGAAAAATGGTCACTGGTTTCAAGCATTAGCGATTCAAGCCCAGCTTCTGGTACATTCAGGCTTGAGTGGGAACCCACAAGAAAAGAATTGGTCATCAAGCATAGAGAAAAAGTATATTGGACAAGTGGAAAACTGCTGATAAACAATACATTTGAGTATATATCTGGAGAAGACTTTGAGGTCAATGTTGTGTCTAATAAGGAAGAAGAGTACTTCACATACTGGCCAAATGAAGACGGTTTTACCAAATGGACTCTATTACAAACTGGCCTACTGATAAACAGTGAAGGACGTGACATAGCAAGGGCAGATTTGTGCAATGGGTTCAATACTAATGGAGGGTGCCAAAAGTGGAATGAACTGTGCAGGAATCCTGGTGATATGTTTGATAGCAAGTTAGTTTACGTTAATGAAAATATGGTATACGATATAGCAAATACTAATTATGGCATAAATGACTGCGAAGAAATATGCTGGAGTAACTGCAGCTGTTTTGGATTCAGAAACTTTTATGGTAATGGAACTGGTTGTCTCTTCTTGGTATCAACTGAAGGTCTTAACATTGCAAGCAGTGGTTATGAGTTATTTAACATTCTGGTTAAGAACACCGATCCCAAAGTATCGAACAAGAGGATATGGATTTATATTGGAATTGGGACTCTTACGCCATTTGTGGGGCTTTTCATTGTGCTCTTAGCAGTAAGGAAACGAAGACATGTGCTTCGAGAGAGGGAAAGAATGAGAATGCAGATTGAAGATCTAGAAGGTTCAAGGCAATACTCTGATGGTGATGATCTAGAAGGAGATTTGAGCAACGGAGATGACTTAAAAGTGTTTACCTATTCATCAATAATTGTGGCAACCAATGGCTTTTCATCAGAAAACAAGTTAGGACAAGGTGGCTTTGGACCTGTTTTCAAGGGAATTCTACCTTCGGAGCAAGAGGTAGCTGTGAAGAAACTTTCAAAAACATCTGGACAAGGAATGACTGAGTTTAGAAATGAATTAACACTCATTTGTAAGCTTCAGCATACAAATCTTGTTCGGCTAATCGGTCATTGCATTCATGAACGAGAGAGAATGTTGATCTATGAGTATATGCCCAACAAAAGTTTGGACTTCTTTTTATTTGATTCCAATAGAAGAAAAATGTTAGATTGGAACAAACGCTTTAGCATAATCGAAGGAATTGCTCAAGGACTACTATACCTTCACAAATACTCAAGACTTCGAATTATCCACAGAGATTTGAAGGCTAGTAATATTCTCCTTGATGAAAATATGAACCCAAAAATTTCTGATTTTGGTGTGGCAAGAATGTTCACAAAACAAGAAACTGAAGCAAATACCAACAGAATTGTTGGGACATATGGTTACATGTCTCCTGAGTATGCGATGGAAGGAGTATTTTCTACGAAGTCTGATGTGTATAGCTTTGGAGTGCTGCTCCTTGAAATTATCAGTGGTAAAAAAAACAACAGTTTCTACTCTGAAGACAGACCAATTAATCTAGTAGGACATGTATGGGAGCTATGGAAAGAAGGTGCGGTTCTTCAGTTGGTGGATCCATTACTAAATGAGTCGTTTTCTGAGGATGAAGTGCTGAGAAGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCGGATGATCGTCCCACCATGTCCAATGTTATAGCAATGTTAACTAACAAAATAAAAGTGGATATTTTGCCTAAGAAACCAGCATACTACGGTGGAACAAGAGTTTTTGAGGAAGAAACTTACGGCGAAGATGTGGATGTAGATTCCACGTATGAAAACTCTTATTCACATGTACAAAATATAGATAGTTCCAGCGAAGAAATCACTAAATTAATCTAA 2403 0.3783 MVCTEKGKPQVLLFFTYLSLWCNTISTYVNAENTDSMKPGDILNASATSTLCSKQGRYCMNFNQNTDFDNLTYLSIFAKGKDNWLVWIANRDQPVDMDSAVLSLNQSGALKIESKIGEPIILYASRQHSNNSSNIVATLLDTGNFVLKDIQKNIVLWQSFDHPTDSLLPGMKLGVNRKTGEKWSLVSSISDSSPASGTFRLEWEPTRKELVIKHREKVYWTSGKLLINNTFEYISGEDFEVNVVSNKEEEYFTYWPNEDGFTKWTLLQTGLLINSEGRDIARADLCNGFNTNGGCQKWNELCRNPGDMFDSKLVYVNENMVYDIANTNYGINDCEEICWSNCSCFGFRNFYGNGTGCLFLVSTEGLNIASSGYELFNILVKNTDPKVSNKRIWIYIGIGTLTPFVGLFIVLLAVRKRRHVLRERERMRMQIEDLEGSRQYSDGDDLEGDLSNGDDLKVFTYSSIIVATNGFSSENKLGQGGFGPVFKGILPSEQEVAVKKLSKTSGQGMTEFRNELTLICKLQHTNLVRLIGHCIHERERMLIYEYMPNKSLDFFLFDSNRRKMLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIISGKKNNSFYSEDRPINLVGHVWELWKEGAVLQLVDPLLNESFSEDEVLRSVHAGLLCVEENADDRPTMSNVIAMLTNKIKVDILPKKPAYYGGTRVFEEETYGEDVDVDSTYENSYSHVQNIDSSSEEITKLI* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1497 800 Pfam PAN-like domain 322 359 IPR003609 -
Mtr8g1497 800 ProSiteProfiles Protein kinase domain profile. 471 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1497 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 787 - -
Mtr8g1497 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Mtr8g1497 800 SMART blect_4 48 163 IPR001480 -
Mtr8g1497 800 ProSiteProfiles Bulb-type lectin domain profile. 34 160 IPR001480 -
Mtr8g1497 800 PIRSF SRK 7 280 IPR024171 GO:0004674
Mtr8g1497 800 PIRSF SRK 277 794 IPR024171 GO:0004674
Mtr8g1497 800 SUPERFAMILY Protein kinase-like (PK-like) 455 758 IPR011009 -
Mtr8g1497 800 Gene3D - 28 160 IPR036426 -
Mtr8g1497 800 Gene3D Transferase(Phosphotransferase) domain 1 547 751 - -
Mtr8g1497 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 187 IPR036426 -
Mtr8g1497 800 SMART serkin_6 471 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1497 800 Pfam D-mannose binding lectin 86 187 IPR001480 -
Mtr8g1497 800 Pfam Protein tyrosine and serine/threonine kinase 474 740 IPR001245 GO:0004672|GO:0006468
Mtr8g1497 800 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 787 - -
Mtr8g1497 800 CDD STKc_IRAK 477 744 - -
Mtr8g1497 800 Gene3D Phosphorylase Kinase; domain 1 441 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1497 Mtr-Chr8 19653998 19657150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1497 449 758 Receptor kinase-like Gene Family AT3G45860 58.013 8.60e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1497 PK_Tyr_Ser-Thr 2.8e-50 CL0016