Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1494 ATGTGCAATATAGTGTTGTATAAGATCATAAAATCACTCAAATCCTCTCAATTCTTTTTCTTCTATATGGAAGACTTAAACATGTGGCTTTCCTTCTATATGAATGAAAGTGTTAACCTTGATTTCCCTATAAGAAGGTTTTGCCCTGCAAGAATGGAGCAAGATCAAGAAGGAGAGTGCCATGACCAAGAGACAATACTTGATGATGTTGAATTGTGTACTTTTGATACTACCACCACTTCTTGTTTATTACCTTCTTCGGAAGTCGATGACTTTGTTGATAGCTTCATCAACATGGATCAATATTCAGATCATGAGTCTCAAGAGAAGAATCATCAAAGTCAAAGTTTTGATCATAACTTTTTGGTGAATGATGATGTTTTTGGATATGATCCAACCACAATGGAGGATGAAGAATTAGAGATCTGCGAAAATACAACGATCACAATGGAAGACGAAGAAGTTGAAATGAATGGCAACTTTGGTGCTATTCCACAATCACAAGCCAGTCTCGGTATGAACCAAGGTCTTGACTTGGTCCATACGCTATTGGCTTGTGCCGAGGCCGTTGGTTGTAGAGACAACAATCAGGCGGATTTGTTACTTGGTAAAATTTTGGCTTTGTCGAGTTCTTCAGGAGATTCATTACAAAGAGTCTCCTTCTGTTTTGCGACGGCATTGAAGTGTAGGTTATCACTTTATCCACAAAATGTATTTTCAAATAGTACACTCACAACAAGTACTTCTAATGATGTTTCTTTGATTACTAGGGAGAATAAGTTGGAAGCTTTTCAGCTTCTTTACCAAACCACACCTTACATTACTTTCGGTTTCATGGCTGCAAATGAAGCTATATGTCAAGGATCAAAAGGAAAAAGCTCAATACATATAATTGATTTAGGAATGGAGCATGCTCTTCAATGGCCTTCGCTTATAAGGAGCCTCGCTTCGAGGCCTGAGGGACCTCCAAAGCTCAGGATAACAGGATTCAGTACGAATGAAGAAAACAACGCAAAACTTCGCGCTAGCATGAATTTGCATGTAGAGGAAGCACTCTCATTGGGAATAGTCCTTGAATTTCGCATAATATCAGAGCCGGCAACTCCTTCTCTTCTTACAATCGAAAACCTCGGCTTGAGAGAAGGTGAAGCTTTATTTGTTAATAGCATCTTGAAATTACACAAATATGTGAAAGAAAGTAGAGGCTATCTAAAATCAATTCTCCAATCAATCAAGAAGCTAAGTCCAATTGCACTCACTGTTGTAGAGCAAGACACAAACCACAATGGACCTTTCTTTCTTGGTAGGTTTCTAGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAGGCAAGTATGCCAAGAAATAGTCCAATTAGGATGAAAATAGAGAGAATACATTTTGCAGAAGAAATTTGTAACATTGTGGCTTGTGAGGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCAAGTAATGCCACTCAAGTGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCATGTGAAAAGGGTTGCCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTGTCATATACTGACAGAGCTTCTTAA 1692 0.383 MCNIVLYKIIKSLKSSQFFFFYMEDLNMWLSFYMNESVNLDFPIRRFCPARMEQDQEGECHDQETILDDVELCTFDTTTTSCLLPSSEVDDFVDSFINMDQYSDHESQEKNHQSQSFDHNFLVNDDVFGYDPTTMEDEELEICENTTITMEDEEVEMNGNFGAIPQSQASLGMNQGLDLVHTLLACAEAVGCRDNNQADLLLGKILALSSSSGDSLQRVSFCFATALKCRLSLYPQNVFSNSTLTTSTSNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAICQGSKGKSSIHIIDLGMEHALQWPSLIRSLASRPEGPPKLRITGFSTNEENNAKLRASMNLHVEEALSLGIVLEFRIISEPATPSLLTIENLGLREGEALFVNSILKLHKYVKESRGYLKSILQSIKKLSPIALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEASMPRNSPIRMKIERIHFAEEICNIVACEGPDRMERHERVDQWRRQLGRAGFQVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRPIMMASAWQVASLSYTDRAS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1494 563 ProSiteProfiles GRAS family profile. 170 552 IPR005202 -
Mtr8g1494 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 555 IPR005202 -
Mtr8g1494 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 555 - -
Mtr8g1494 563 Pfam GRAS domain family 179 552 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1494 Mtr-Chr8 19616201 19618684 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1494 176 553 GRAS Transcription Factor Family AT1G66350 38.120 1.31e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr8g1494 GRAS 6.8e-110 CL0063