Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1490 ATGGTAGCTTCAACCGAATCGCCCTTCAAACCAGACATCTTAAAAGGCAAAGTAGCTTTAATAACTGGCGGAGCGTCGGGAATTGGGTTTGAAATATCAACACAATTGGGGAAACATGGAGCGTCGGTTGCTGTGATGGGTCGTCGGAAGCAAGTTCTTCAATCTGCTGTTTCGGTTCTTCAATCGCTTTCGATTCCTGCTGTTGGGTTTGAAGGGGATGTGAGGAAGCAGGAAGATGCGGCGAGAGTTGTTGATTTGACTTTTAAGCATTTTGGGAGGATTGATATTCTTGTTAATGCTGCTGCTGGGAATTTTCTTGCTGCTGCTGAAGATCTTTCGCCGAATGGGTTTCGAACAGTTTTGGATATCGATTCTGTTGGCACATTCACTATGTGTCATGAAGCACTTAAGTATCTCAAGAAAGGGGCACCAGGTAGGAACTCTTCTAGTGGGGGATTAATAATAAACATTAGTGCTACCTTGCATTATGGAGCTTCTTGGTATCAAATTCACGTATCTGCTGCAAAGGCAGCTGTTGATTCCACTACAAGAAACTTGGCACTGGAATGGGGAACAGATTATGATATCAGAGTCAATGGGATTGCACCAGGTCCAATAGGTGAAACTCCTGGCATGAGTAAACTGGCTCCTGAAGAAATAGGTAGCAGAGGCAGAGATGAAATGCCTCTGTATAAACTTGGGGAGAAATGGGATATTGCAATGGCTGCTCTCTACTTAGCATCAGATGCAGGAAAATACATTAATGGTGACACTATGGTAGTTGATGGAGGACTTTGGCTGAGCCGGCCACGTTATTTGCCGAAGGAGGCAGTGAGACAGGTATCACGAGAAGTAGAAAAAAGATCCAGAAATGAACCAATTGGTGTTCCAAAAAGTAAGCTATGA 906 0.4404 MVASTESPFKPDILKGKVALITGGASGIGFEISTQLGKHGASVAVMGRRKQVLQSAVSVLQSLSIPAVGFEGDVRKQEDAARVVDLTFKHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGAPGRNSSSGGLIINISATLHYGASWYQIHVSAAKAAVDSTTRNLALEWGTDYDIRVNGIAPGPIGETPGMSKLAPEEIGSRGRDEMPLYKLGEKWDIAMAALYLASDAGKYINGDTMVVDGGLWLSRPRYLPKEAVRQVSREVEKRSRNEPIGVPKSKL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1490 301 MobiDBLite consensus disorder prediction 279 301 - -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 146 162 IPR002347 -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 172 191 IPR002347 -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 194 211 IPR002347 -
Mtr8g1490 301 PRINTS Glucose/ribitol dehydrogenase family signature 229 249 IPR002347 -
Mtr8g1490 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 267 IPR036291 -
Mtr8g1490 301 CDD TER_DECR_SDR_a 14 267 - -
Mtr8g1490 301 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 6 301 IPR045017 GO:0008670|GO:0009062
Mtr8g1490 301 Gene3D - 2 271 - -
Mtr8g1490 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 IPR002347 -
Mtr8g1490 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 IPR002347 -
Mtr8g1490 301 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 IPR002347 -
Mtr8g1490 301 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE-LIKE 6 301 - -
Mtr8g1490 301 Pfam Enoyl-(Acyl carrier protein) reductase 23 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1490 Mtr-Chr8 19444727 19449633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1490 6 301 Acyl Lipid Metabolism Gene Families AT3G12800 79.461 1.32e-165 460