Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1482 ATGGCTCTCAAATTTCCAAACCCTTCAAACCCATTTCTTCTTTCATCATCACCACTAACCCCATCTCTTCAAAATCCTAACTTTTTCACTCTACACTTCAGTAACCATCGCAGAAAGCTCAAGCTTCGAGCTTCATCTACAGCAGACCCAAATGGAGCTGATGGGTCATCTTGGTCAGAGTCATTGGACCGCGCTTCGAGGCGGTTTTTGGTGAAATTTGGAGATATGGTGAAGAAAGAGACGGGTGTTGATTTGGGAGATGGGGTTGGGAAGGTTGGTGAGTTTGTGGATGGTGTGAGGAAGGTTGGAAGTGAGTTGAGAATTCCGAGTTTGGATGAGTTTGTTGATTGGAACCGGTTCGAGAATTGGAAGAATGTCAAGAACTGGGAACCTAGGCGAATCGGTGCTTTAGTTCTGTATATATTTGTTGTAGCATTTGCTTGTCGAGGAGTATTTGTAGCAATTCAAGCACCTTTCCTAAACCACCAGAGGAAAGAGTCGACTGAAGCCTACATGGAAGTGTTAATTCCCGCGCCAACCCCGACTAACATCAGAAAATTCAAGAAGGTCGTGTGGAGGAAGACAATGCCAAAAGGCCTGAAAATTAAAAAGTTTATTGAAAGACCTGATGGAACACTTGTTCATGATTCCACTTTTGTTGGAGAGGATGCATGGGAGAATGATCAGGAATCTTCTGATGAACATGTAAAACAAATTGTTGGGGATGAAGAAAGGTTAAACAGTGAAGAGAAGAACGAATTAACCAAAGACCTGGCCATCTCAGCAGGCGAAGTTCAAACTGAGGGCACATGGCGTGAGAGACTTCATAAATGGAGGGAAATCCTTGGAAAAGAACGTCTTGTTGAGCAATTAAATTCCTTAAATGCCAAATATGAGGTTGATTTTGACATGAAAGAGGTTGAAAATAGTCTTCGCAAAGAAGTTGTAGAAAAGGTGAGAACCACTCAGGGAACAAGGGCTCTGTGGATAGCTAAGAGATGGTGGAGATATCGTCCTAAACTTCCTTATAATTACTTTCTTGACAAACTTGATAGTTCGGAGGTAGAAGCTGTTATCTTTACCGAAGACATGAAAAGATTATACGTGACAATGAAAGAAGGCTTCCCATTGGAATATGTTGTTGATATTCCTCTTGATCCTTATCTTTTTGAGATTATTTCGAGTTCTGGAGTGGAAGTAGATCTCCTTCAAAAGCAACAAATCCATTATTTTTTGAAGGTTGCGATTGCATTTTTACCTGGAATACTAATTCTAATTCTTATGAAGCAGTCTTTGGCCATTCTGCACCTCACTTCCAGTCGTTTTCTTTACAAGAAGTATAATCAACTCTTCGATATGGCTTATGCTGAAAATTTCATTCTGCCAGTTGGAGATGTTGGTGAAACAAAATCTATGTCCAAGGAAGTTGTGTTGGGAGGTGATGTTTGGGATCTGCTTGATGAGTTGATGATATATATGAGAAATCCTATGCAGTTCTATGAAAGGGATGTGAAGTTTGTTCGGGGTGTTCTACTCTCTGGACCTCCAGGAACAGGAAAAACACTTTTTGCAAGGACACTTGCAAAACAAAGTGGATTGCCATTTGTTTTTGCTTCTGGCGCTGAGTTCACAGATAGTGAAAAGAGTGGAGCAGCTAAGATTAATAAGATGTTCTCCCTTGCTAGGAGAAATGCACCTTGTTTTGTATTTGTGGATGAAATAGATGCCATTGCTGGAAGACATACTAGGAAGGATCCACGTAGAAAGGCAACTTTTGAGGCTCTTATTACACAGCTTGATGGAGAGAAGGAAAAAACCGGTATTGACCGTGTATCCCTCAGACAAGCGGTCATATTTATCTGTGCCACAAATAGAGCAGATGAGTTAGATCTTGACTTTGTTAGACCTGGACGAATTGATCGTCGTCTATACATTGGTTTGCCTGATGCAGAACAAAGAATCAAAATTTTTGATGTTCATAGTTCTGGAAAGCAACTTGGTGAGGATGTGAATTTCACGAAGCTTGTCTTCCGCACTGTTGGATTCTCTGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGTCGGTGAGAAATGGGCATCCAAAAATATTCCAGCAAGACATTACTGATGTATTAGATAAACAACTGCTTGAGGGTATGGGTGTCCTTATCACTGAGGATGAGCAGAAGAAGTCTGAAGAAAGAGTATCTTTTGAAAAAAAGAGACTGCTTGCTGTACATGAAGCCGGTCATATTGTGCTTGCTCACTTGTTTCCTAGGTTTGATTTGCATGCATTTTCACAGCTCCTGCCCGGTGGTAAGGAAACTGCAATATCTGTTTTCAATCCTCGAGAAGATATGGTAGACCAAGGTTATACAACTTTTGGTTACTTGAAGATGCAAATGGTAGTGGCTCATGGTGGTCGATGTGCTGAACATGTTATATTTGGCGAGGATATTACTGATGGAGGAAGGGATGATCTTGAAAAGATAACAAAGATTGCTCGGGAGATGGTAATCAGCCCTCAAAATAAACGGTTGGGGTTAATAGGTTTAACTAAAAGGGTTGGCTTAGCTGATCAACCAGATGCTTCAGATGATGATTTGATAAAATATAGATGGGATGATCCTCAAGTAGTTCCTACAAAGATGTCAGTGGAGTTATCTGAGCTCTTTACAAGGGAGTTGACAAGGTACATTGAAGAAACCGAAGAACTTGCAATGAATGCTTTGAGGGACAATAAGCACATCGTGGACATGGTTGCAAGAGAACTATTGGAGAAGTCAAGAATAACTGGATTTGAGGTTGAAGAAAAAATGAAACAACTGTCTCCAGTAATGTTTGACGACTTTGTGAAGCCATTCCAAGTAGACTGCGAAGAGGACGGACCATTGCCGCATAACGATGATATACACTATCGCACAGCTGACTTATACCCGGCTCCTCTCCATAGATGTTAA 2970 0.4094 MALKFPNPSNPFLLSSSPLTPSLQNPNFFTLHFSNHRRKLKLRASSTADPNGADGSSWSESLDRASRRFLVKFGDMVKKETGVDLGDGVGKVGEFVDGVRKVGSELRIPSLDEFVDWNRFENWKNVKNWEPRRIGALVLYIFVVAFACRGVFVAIQAPFLNHQRKESTEAYMEVLIPAPTPTNIRKFKKVVWRKTMPKGLKIKKFIERPDGTLVHDSTFVGEDAWENDQESSDEHVKQIVGDEERLNSEEKNELTKDLAISAGEVQTEGTWRERLHKWREILGKERLVEQLNSLNAKYEVDFDMKEVENSLRKEVVEKVRTTQGTRALWIAKRWWRYRPKLPYNYFLDKLDSSEVEAVIFTEDMKRLYVTMKEGFPLEYVVDIPLDPYLFEIISSSGVEVDLLQKQQIHYFLKVAIAFLPGILILILMKQSLAILHLTSSRFLYKKYNQLFDMAYAENFILPVGDVGETKSMSKEVVLGGDVWDLLDELMIYMRNPMQFYERDVKFVRGVLLSGPPGTGKTLFARTLAKQSGLPFVFASGAEFTDSEKSGAAKINKMFSLARRNAPCFVFVDEIDAIAGRHTRKDPRRKATFEALITQLDGEKEKTGIDRVSLRQAVIFICATNRADELDLDFVRPGRIDRRLYIGLPDAEQRIKIFDVHSSGKQLGEDVNFTKLVFRTVGFSGADIRNLVNEAAIMSVRNGHPKIFQQDITDVLDKQLLEGMGVLITEDEQKKSEERVSFEKKRLLAVHEAGHIVLAHLFPRFDLHAFSQLLPGGKETAISVFNPREDMVDQGYTTFGYLKMQMVVAHGGRCAEHVIFGEDITDGGRDDLEKITKIAREMVISPQNKRLGLIGLTKRVGLADQPDASDDDLIKYRWDDPQVVPTKMSVELSELFTRELTRYIEETEELAMNALRDNKHIVDMVARELLEKSRITGFEVEEKMKQLSPVMFDDFVKPFQVDCEEDGPLPHNDDIHYRTADLYPAPLHRC* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1482 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 717 IPR027417 -
Mtr8g1482 989 Gene3D - 649 723 - -
Mtr8g1482 989 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 23 989 - -
Mtr8g1482 989 SUPERFAMILY FtsH protease domain-like 741 953 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr8g1482 989 Pfam AAA+ lid domain 669 710 IPR041569 -
Mtr8g1482 989 CDD AAA 508 647 - -
Mtr8g1482 989 Gene3D - 467 648 IPR027417 -
Mtr8g1482 989 Gene3D Peptidase M41 732 947 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr8g1482 989 PANTHER ATP-DEPENDENT PROTEASE 23 989 - -
Mtr8g1482 989 Pfam Peptidase family M41 739 940 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr8g1482 989 SMART AAA_5 506 649 IPR003593 -
Mtr8g1482 989 Pfam ATPase family associated with various cellular activities (AAA) 510 646 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1482 Mtr-Chr8 19173949 19188120 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1482 8 19173949 19188120 Mtr8g1482 8 19173949 19188120 ECH