Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1478 ATGGCAGAAGAGTTGATATTATTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCAAGGATAGCATTGGCTGAAAAAGGCATAAAGTATGAATACAAGGAAGAAGATCTTGAAAACAAGAGCCAAATGCTTTTGAAAATGAACCCAATTCACAAGAAGATTCCTGTTCTTATCCATAAGGGAAAACCAATTTCTGAGTCCATCATTATTGTTGAATATATTGATGAGGTTTGGAAGGATAAGGTCCCATTTCTACCCTCAGATCCTTATCAGAAAGCTCAAGCAAGATTTTGGGCTGATTTTGTCAACAAAAAGGTTGGTGATGTTGGAGGGAGGATATGGGCTGGAAAGAGAGATGAGATTGAATTAGCAAAGAAGGAGTTGATTGAAGGCTTAAAGGAATTAGAGAATGTGCTTGGAGACCAACCTTATTTTGGTGGTGACACATTTGGGTTTGTTGACATTGCTTTGATCCCTTTCTATAGTTGGTTTTATACTTATGAGAAATTATGCAACTTCAAAGTTGAGGAAGAGTGTGAAAAGCTGATTGTTTGGGCAAAGAATTGCAAGCAAAAAGAGAGTGTTTCCAAATCTATTGCTGATGAGAAAGAAGTGTATGATTTTGTTGTTAACTATAGGAAGAGGTTTGAGTTGGATTGA 660 0.3682 MAEELILLDEWLSMFGMRARIALAEKGIKYEYKEEDLENKSQMLLKMNPIHKKIPVLIHKGKPISESIIIVEYIDEVWKDKVPFLPSDPYQKAQARFWADFVNKKVGDVGGRIWAGKRDEIELAKKELIEGLKELENVLGDQPYFGGDTFGFVDIALIPFYSWFYTYEKLCNFKVEEECEKLIVWAKNCKQKESVSKSIADEKEVYDFVVNYRKRFELD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1478 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Mtr8g1478 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Mtr8g1478 219 Coils Coil 118 138 - -
Mtr8g1478 219 Pfam Glutathione S-transferase, C-terminal domain 120 169 - -
Mtr8g1478 219 Gene3D Glutaredoxin 1 87 - -
Mtr8g1478 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Mtr8g1478 219 CDD GST_N_Tau 5 78 - -
Mtr8g1478 219 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Mtr8g1478 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Mtr8g1478 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Mtr8g1478 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Mtr8g1478 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Mtr8g1478 219 Gene3D - 88 219 - -
Mtr8g1478 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Mtr8g1478 219 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1478 Mtr-Chr8 19117117 19118890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1478 1 216 Glutathione S-transferase Gene Family AT1G78380 63.889 2.71e-100 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1478 8 19117117 19118890 Mtr8g1478 8 19117117 19118890 ECH