Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1470 ATGAATACTTTAAAATGGGGTCTGATCAAGTGCCAGGTTTATTTTGTTCCGTTCATCAAGAAAGTCACCTATTATGGGTCCTACTCCTGTGCCATTCTTTCAAATCCTCAATTCTCAATATTTTCAACTCCCTGGTATCAAACCCCCATGGCAGGGCCTTCCAAAACTACAATTCCCAATAAAATTCCATGGCCCACTCCAGGGACCCCATTGATCTTGCACGAGACTCGTGAAGGCAATCAAGCAATGATTAGTTCGTGCTGCTTGCAGAAGGTTACTGAATCGGCCTTCGGTGCAGCAATCAAGGGTGGTGCCAAGGTCATAATTTCTGCCCCTAGTAAGGATGCTCCCATGTTTGTTGTTGGTGTTAACGAGAAGGAATACAAGCCAGAGTTTGATATCGTCTCCAATGCTAGCTGCACTACCAACTGCCTTGCACCACTTGCAAAGGTTATTAATGACAGGTTTGGCATTATTGAGGGTTTGATGACCACTGTTCAATCTATCACTGCTAGCCAGAAGACTGTTGATGGGCCATCAGCCAAAGACCGGAGAGGTGGAAGAGCTGCCTCATTTAACATCATTCCTATCAGCACTGGAGCTACTAAGGCTGTTGGCAAAGTGCTTCCTGCTCTGAATGGAAAGTTGACTGGAATGGCATTCTGTGTCCCAACTGTAGATGTCTCAGCTGTTGACCTTACAGTGAGGCTCGAGAAGGCTGCCACCTATGATCAAATCAAAGCTGCTATCAAGGAGGAGTCCGAGGGCAACTTGAAAGGAATCCTTGGTTACACCGAGGATGATGTTGTCTCCACTGACTTTATCGGTGATACCAGGTCAAGCATCTTTGATGCCAAGGCAGGAATTGCCTTGAACGACAATTTTGATAAGCTTGTCTCTTGGTATGACGAGTTGGGTTACATGTAA 927 0.4574 MNTLKWGLIKCQVYFVPFIKKVTYYGSYSCAILSNPQFSIFSTPWYQTPMAGPSKTTIPNKIPWPTPGTPLILHETREGNQAMISSCCLQKVTESAFGAAIKGGAKVIISAPSKDAPMFVVGVNEKEYKPEFDIVSNASCTTNCLAPLAKVINDRFGIIEGLMTTVQSITASQKTVDGPSAKDRRGGRAASFNIIPISTGATKAVGKVLPALNGKLTGMAFCVPTVDVSAVDLTVRLEKAATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDNFDKLVSWYDELGYM* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1470 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 99 112 IPR020831 GO:0016620
Mtr8g1470 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 134 152 IPR020831 GO:0016620
Mtr8g1470 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 161 177 IPR020831 GO:0016620
Mtr8g1470 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 218 235 IPR020831 GO:0016620
Mtr8g1470 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 258 273 IPR020831 GO:0016620
Mtr8g1470 308 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 139 302 - -
Mtr8g1470 308 SMART gp_dh_n_7 60 140 IPR020828 GO:0051287
Mtr8g1470 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 156 IPR036291 -
Mtr8g1470 308 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 145 302 IPR020829 GO:0016620
Mtr8g1470 308 Gene3D Dihydrodipicolinate Reductase; domain 2 138 303 - -
Mtr8g1470 308 Gene3D - 94 307 - -
Mtr8g1470 308 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 55 307 - -
Mtr8g1470 308 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 138 145 IPR020830 GO:0016620
Mtr8g1470 308 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 55 307 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1470 Mtr-Chr8 18826077 18828728 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1470 8 18826077 18828728 Mtr8g1470 8 18826077 18828728 ECH