Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1428 ATGCTTTACCACAACACAAAAGCCATGGCTTATTTTCTACTACTAGCATCAATGATAGTTGGGATTGGAATGTCAGATTCATCCAAAGAGAAACAAGAATGCACAGCTCAATTAACAGGGCTAGCATCGTGCCTTCCCTATGTTGAAGGTGAAGGAAAAACTCCAGCACCAGATTGTTGTGATGGTCTCAAAACACTTCTCAAGACAAACAAGAAGTGTTTGTGTGTAATTATCAAAGATCGTAATGATCCTGATTTGGGTGGTATAGTTATTAATGTTACTCTCGCTTTGAATCTTCCAACAGTTTGTAATGCCCCTGCCAATATCTCTAAATGTCCTGAGCTGCTGCACATGGATCCCAATTCAGCTGAGGCTCAAGTTTTTTATACATTAAACAATGGCTCCAGCAATATTAGTCCAAGTGCTGCACCTAGTCCATCAGATGGAGCAAGCAGCCAAGCAAGAAGTACAACACAGAAGAATGATGCATTCAGAAAAGAGAAGAGATTGATTGGTTTAGAGTTTTTGGCTATTGGGGTTTTAGTTTGGTTTTTATTTGGCTCTGCTGCTGGAAACTTTTTCATTTGA 588 0.3963 MLYHNTKAMAYFLLLASMIVGIGMSDSSKEKQECTAQLTGLASCLPYVEGEGKTPAPDCCDGLKTLLKTNKKCLCVIIKDRNDPDLGGIVINVTLALNLPTVCNAPANISKCPELLHMDPNSAEAQVFYTLNNGSSNISPSAAPSPSDGASSQARSTTQKNDAFRKEKRLIGLEFLAIGVLVWFLFGSAAGNFFI* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1428 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 113 IPR036312 -
Mtr8g1428 195 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 16 185 IPR043325 -
Mtr8g1428 195 MobiDBLite consensus disorder prediction 138 159 - -
Mtr8g1428 195 Gene3D - 31 112 IPR036312 -
Mtr8g1428 195 Pfam Probable lipid transfer 16 112 IPR016140 -
Mtr8g1428 195 SMART aai_6 34 112 IPR016140 -
Mtr8g1428 195 CDD AAI_LTSS 41 104 - -
Mtr8g1428 195 PANTHER PROTEIN YLS3-LIKE ISOFORM X1 16 185 - -
Mtr8g1428 195 MobiDBLite consensus disorder prediction 138 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1428 Mtr-Chr8 17774582 17776900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1428 26 186 Acyl Lipid Metabolism Gene Families AT2G44300 49.432 4.15e-57 177