Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1421 ATGGTCAGTGACAAAGGGGAGCAAAAAGTATCTCTAAGGTATCCAAGCCTCAAATCTCTTAGCACTCACTTTAACGATCAAAGCTTTGGAAAGCCAGAGGGGAAGAAAATCCCTACACTTGACGAGAAATACGTGATGGGAATCGAATTTGCAATCAAAACACTTTGTAGAAGCATCTCAGCTAATGAATTTGCAGAGAAAGGAAACTCATGGAGCTTCTGGGCCTCTCCTCCTAAGAGCCCAGTTATCAATGATGCTGCTACTAGTTTGGTTCCCAAGCAGGGTTCATGTTTGTCTGAGATCAAGTTCTCTGGTATGATGCAGTGGGGCCAACGCCGGCAAGTTCGGTTCTTGGGCCGTCATGAGGAGCAAAAGGTTGAACCTTTACCTGTGATTCAGAAGGAAAAAGGTGTCATTTTTAAGGCCAGAGTAGGGACTATTGTGAAGAAGAGAAAGAACATTGAAAAAGAAGAAATGGAAGAAGTTGTGAAGGTAGCTCCTTTTGAGGTACAGAGGGTGACTCGTCAATGCAACAAAAATCAACAAGGTGTAAGTAGTAGCAGCGTGGCCAAAAAGTCTAAGAAAAATCACCAAGGTGTGAGTAGTGGCAGTGGGGATAAAAAGTCTGAGAAAGCAGTGAATGACACCAAGAAGCAGGAACTTGTGGTTTATAGAAGAAACAAGCCAAAAATATGGATTGATAGATGGGCTGCTGAGAGGTATAAGTTAGCAGAGGAGAACATGTTGAAGGTTATGAAGGAAAAAGGAGCTGTGTATGGAAACTCAATAATGAGGCAAGAGCTGAGATCAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAACACATGGCTGGAAAAGTGGCACCAGGAGGAGTTGAAAGATTCAGACGGAAACACAATGCCGAAGGTTCAATGGAATACTGGTTAGAGAGTGCTGATCTTGCTGATATTAGAAAGGAATTGGGTGTTCAAGATCCTTACTGGACTCCTCCCCCTGGTTGGAAGCCTGGTGACAGCATTTCACCAGAAAATGTTACTAGTCATGAACTCAGAGAGATAAAGGAGGAAATAATTAAGTTGAAAAGAGAAATGAGGGAGCTCACATCAAAAAGAGAAGAGGAAGCATTGGCTCTTGTGACTACTCCTAGTTCTTGTATGTCAAGTTTGAATTTTGAGGACTATGGTTCCCAGGTTTCTAAGCAGGATATTTATTTGGAGCTGGTTCATAAAAAGGCTAAAATTGAAGAACAGCTAAAAGAAATTTCTTTGGCATTGAATGGCATGGAGGATCAAATGGGAATGCTGAAACCAACACTAGTAGAAGAACCACAAATGTCAGAATCATTAACACCACCAGTGTTATTGCTTGGACCAACATCATTGACAGAAAACATTGGAGAAGAGAAAGGTAATAATGTCAAAAAAACAAAATCAGCAGACACACAAATGGTAGTAGGAAGCAGAGCAGCAGAGGACAAAGCAGCAAAGATAGAAAGGCTGAAAAGTGGTTTCCAAATTTGCAAACCAAGAGGGACCTTTATGTGGCCAAACATGAGCTTGTCTCCACATGTTGTAACCAACCTTGATGAACATACTGTGGTCCCAACCCCAACCTCAGCTTCCTCATCTACCACCTCAGCACCCAAGCTTGTCTCAAATTCCAACACTCATAACTTGTCATTGTCCATACCTATTCCATCTTCTCCTGTTAAGCCATTAGCAGAGAGGCGCCCTGTGAGCACAACTACTTTGACACATGTCACTGGACCCTTTTCCCCTCATCTTTCTCCTCCACTAGAGACCACAAAAACCACAATCACTACCTCCATCACCAAGAATGGTTCATTTATTAACCTTAATGAAGCTCCTTTTGGCCAAGAGTAA 1902 0.4222 MVSDKGEQKVSLRYPSLKSLSTHFNDQSFGKPEGKKIPTLDEKYVMGIEFAIKTLCRSISANEFAEKGNSWSFWASPPKSPVINDAATSLVPKQGSCLSEIKFSGMMQWGQRRQVRFLGRHEEQKVEPLPVIQKEKGVIFKARVGTIVKKRKNIEKEEMEEVVKVAPFEVQRVTRQCNKNQQGVSSSSVAKKSKKNHQGVSSGSGDKKSEKAVNDTKKQELVVYRRNKPKIWIDRWAAERYKLAEENMLKVMKEKGAVYGNSIMRQELRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRKHNAEGSMEYWLESADLADIRKELGVQDPYWTPPPGWKPGDSISPENVTSHELREIKEEIIKLKREMRELTSKREEEALALVTTPSSCMSSLNFEDYGSQVSKQDIYLELVHKKAKIEEQLKEISLALNGMEDQMGMLKPTLVEEPQMSESLTPPVLLLGPTSLTENIGEEKGNNVKKTKSADTQMVVGSRAAEDKAAKIERLKSGFQICKPRGTFMWPNMSLSPHVVTNLDEHTVVPTPTSASSSTTSAPKLVSNSNTHNLSLSIPIPSSPVKPLAERRPVSTTTLTHVTGPFSPHLSPPLETTKTTITTSITKNGSFINLNEAPFGQE* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1421 633 PANTHER PROTEIN DYAD 1 615 - -
Mtr8g1421 633 Coils Coil 349 383 - -
Mtr8g1421 633 PANTHER PROTEIN DYAD 1 615 IPR044221 GO:0007131|GO:0051177|GO:0051321
Mtr8g1421 633 Coils Coil 417 437 - -
Mtr8g1421 633 MobiDBLite consensus disorder prediction 541 569 - -
Mtr8g1421 633 MobiDBLite consensus disorder prediction 179 207 - -
Mtr8g1421 633 MobiDBLite consensus disorder prediction 179 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1421 Mtr-Chr8 17679331 17682687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1421 235 323 PHD Transcription Factor Family AT5G22260 37.778 4.21e-06 48.1