Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1413 ATGCTGATATTAGTTCTAGGACTAATTTCAGCTACTTTGCTAGTGATTATTGTTGCAGTTTATGGCTTTTGTTACATAAAAAGATCATCAACAAATGATACTAAAGACATAGAAAGCTTGGAAGAAAAGCAAGAAGAGGTGAAGGAGGATTTGATCATATTTGAAGGTGGAGAGGATTTGACAATATGTGATATATTGGATGCACCAGGTGAAGTGATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTACAAAGGAGTAATAAAGTGAGGTTGTTAAGGTTTTTGAGACCTGTTTGTACTACAAGAGGTGAAGAATTGGATGAAATGATTCTGTTTCTTGGAAGATTAAAGCATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCTAGAGGTGAGAAGCTTCTTGTTCATCCATTTTATAGACATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGAGAGAGTTACAAATGGTCAAACATATGTACAATATCAACTGGTATAGCAAAAGGATTAGAACATCTTCACACATCACATGAAAAGCCAATTATCCATGGAAACCTAAAGTCAAAAAACATCCTTTTGGACAGCTCCTATCATCCACACATCTCAGATTCAGGACTCCATCTTCTGTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAACCACCTGAACTAATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATATAGTCTTGGTGTAATCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAACGAACATCCAACTCCCGATGAAGATTTCTATTTGCCGAATTTCATGAGAAATGCTGTTCTTGGACATAGAATTTCTGATTTATATCATCCTGCTATTCTTCTCAGAAACAGCATAGACGATGAAATTCAAGTTACAGAAGAATGTGTTCTCAAATTTTTTCAACTTGCTATGGCTTGTTGTTCACCTTCACCATCAATTAGACCTAACATAAAGCAAGTTATTAGGAAGCTTGAAGAAATTATACATTAG 1059 0.3551 MLILVLGLISATLLVIIVAVYGFCYIKRSSTNDTKDIESLEEKQEEVKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNICTISTGIAKGLEHLHTSHEKPIIHGNLKSKNILLDSSYHPHISDSGLHLLLNPTAGQEMLESSSAQGYKPPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILLRNSIDDEIQVTEECVLKFFQLAMACCSPSPSIRPNIKQVIRKLEEIIH* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1413 352 Pfam Protein tyrosine and serine/threonine kinase 71 347 IPR001245 GO:0004672|GO:0006468
Mtr8g1413 352 SUPERFAMILY Protein kinase-like (PK-like) 70 348 IPR011009 -
Mtr8g1413 352 Gene3D Transferase(Phosphotransferase) domain 1 146 352 - -
Mtr8g1413 352 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 350 - -
Mtr8g1413 352 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 350 - -
Mtr8g1413 352 Gene3D Phosphorylase Kinase; domain 1 67 144 - -
Mtr8g1413 352 ProSiteProfiles Protein kinase domain profile. 67 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1413 Mtr-Chr8 17587675 17590847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1413 24 350 Carbohydrate Esterase AT5G61570 60.355 9.99e-140 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr8g1413 PK_Tyr_Ser-Thr 4.5e-31 CL0016