Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1365 ATGGCATCATCAATGGCTTCCTTTCAATTGCTTTCTTCTCATCAGCTTTGCATCTCTCCCTTCTCTCGTCTGCCTAAATTCAACACGACATTTACTTCCTGCACCCCCAACAGCAACAATAATAACCGCTTCTCTCTTTCTCTCACTAAACCAACTTCTTCATCCTTTCTCATCATAACAGCTTCTTCTAACGACAATACCATGCTTCCTCCTTATAACGTTTTGATTACTGGCTCAACCAAAGGGATAGGGTATGCTTTGGCGAAAGAGTTTCTAAAAGCAGGAGATAACGTTTTAGTTTGCTCAAGATCAGATGAAAGGGTAGAGACTGCAGTCAAGAGCTTGAGAGAAGAATTTGGGGAGCAGCATGTGTGGGGCACTACATGTGATGTGAAAAATGGAGAGGATGTGAAGAAACTAGTTTCGTTTGCTAAAGAAAAACTGAAATACATTGATATATGGATCAATAATGCTGGATCAAATGCGTATAGCTACAAGCCACTTGCCGAAGCATCAGATGAGGATCTTATTGAGGTGGTTACAACAAACACACTTGGCTTGATGATATGCTGTCGAGAGGCAATAAAGATGATGGTGGGCCAACCTCGCGGAGGTCATATTTTCAATATTGACGGGGCAGGTTCAGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCATTTGACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAATGTCATGGTTCACAATCTTTCGCCTGGAATGGTTACAACAGATCTTCTCATGTCTGGCGCCAATACAAAACAGGCAAAGTTTTTCATTAATGTCTTGGCTGAACCAGCCGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCTATCCCTGCCAACAGATCAATGAAGCCGACATACATCCGGTTCCTCACTGGTTTGAAAGCTTATTCCCAAATATTTTCAAGATTTGCATTTGGGGCAAGGAGGAACCGGTACATTATTGAAGATTGA 1026 0.4191 MASSMASFQLLSSHQLCISPFSRLPKFNTTFTSCTPNSNNNNRFSLSLTKPTSSSFLIITASSNDNTMLPPYNVLITGSTKGIGYALAKEFLKAGDNVLVCSRSDERVETAVKSLREEFGEQHVWGTTCDVKNGEDVKKLVSFAKEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMVGQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVMVHNLSPGMVTTDLLMSGANTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANRSMKPTYIRFLTGLKAYSQIFSRFAFGARRNRYIIED* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1365 341 Pfam short chain dehydrogenase 74 269 IPR002347 -
Mtr8g1365 341 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 292 IPR036291 -
Mtr8g1365 341 PRINTS Glucose/ribitol dehydrogenase family signature 73 90 IPR002347 -
Mtr8g1365 341 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Mtr8g1365 341 PRINTS Glucose/ribitol dehydrogenase family signature 199 215 IPR002347 -
Mtr8g1365 341 PRINTS Glucose/ribitol dehydrogenase family signature 226 245 IPR002347 -
Mtr8g1365 341 PRINTS Glucose/ribitol dehydrogenase family signature 250 267 IPR002347 -
Mtr8g1365 341 Gene3D - 65 315 - -
Mtr8g1365 341 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 25 341 - -
Mtr8g1365 341 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 213 241 IPR020904 GO:0016491
Mtr8g1365 341 CDD SDR_c 74 295 - -
Mtr8g1365 341 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Mtr8g1365 341 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 213 IPR002347 -
Mtr8g1365 341 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 226 245 IPR002347 -
Mtr8g1365 341 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 25 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1365 Mtr-Chr8 16818513 16826081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1365 74 266 Acyl Lipid Metabolism Gene Families AT1G24360 31.818 6.32e-17 78.6