Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1345 ATGGACAATGAATTTGAGGATGGCCAAGCAGCTTCTGATATGATGAGAAGCAATCAACAGAGGAAAAAACAGTCGTTTATCCAGAAGGTGTTGACTATGAGAGAGAGAAATGGAAGGACAATAGAAAGAGGTTCAATTGATTCACATGAAGAAATTTCTGATCCATCCATCCAAAATCAAGGCTCAGTACCTTCCATGTCTTCTTGTGAAGCAGTTCAGAATTTCAATGTTTTCGCTGCAACATGGAACGTTGGAGGTCAATGCCCAAGTGGGAACCTTGATCTGAGTGATTTTCTTCAGGTTCGAAATGAGCCGGATATGTATGTTTTGGGCTTTCAAGAGATTGTCCCTTTGAATGCTGGAAATGTGCTTGTATTAGAGGACAATGAACCTGCTGCGAAATGGCTTGCCTTAATCAATCAATCACTCAATGGTCCTTCAGATTTCTCTTCAAATAAAGGGCTAAAACCCACTGCATCATTCGGTGGGTCATTGTACTTCCAAAAGCCTTCTCTAAAGAAGATCAAGAAAACTTTCAAGAAATTAAACGGAAAGAGGCTGAAAAGTTGTAACTGCATACTTGAAATGGAAAGGAAGGCTGCTAAGGATTTTTGTTTTCGTTGCCAAGAATCAAATGTAAATTTAGACGATTCTTCGACAGAAGAGGAAGATGACAGTTATCCGATTTCCGTTGCTTTGGCTACTAATCAAATGAAATACAGTCTTGTTACTTGTAAGCAAATGGTTGGAATTTTTGTTAGTGTATGGATGAAGAAGGAACTTATTCAATATGTAGGACATTTAAGAATATGTTGCACTAGTCGCGGTATCATGGGATGCCTCGGAAACAAGGGGTGTATATCTGTGAGCATGTCATTTTATCAGACAAGTTTTTGCTTTATCTGTAGTCATCTGGCGTCGGGAGAAAAAGAGGGTGATGAGCTACGCCGAAATCTTGATGTCATAGAGATACTAAAGAACACTCAGTTTCCTAAGATTTGCAAGAATCAGTACAGTAGGATGCCTGACAAAATTTTAGATCACGACCGAATTATATGGTTCGGGGACTTGAATTACAGAATTTCTTTGAGTCGCGATGTTGCTAAAAGGCTTGTGGAAATGAAGGATTGGCCTGCACTATTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCTGGTCGTGTATTTAAGGGGTGGAAAGAGGGGAAGATCTACTTTGCACCTACTTATAAATATGCATTCAACTCAGATACTTATTATGCTGAAGGTGTAAAGGTTTCAAAGAACAAAAGGAGAACTCCAGCTTGGTGTGATAGAATCTTATGGCATGGAAGGGGAATACAACAACTATCATACGTGCGTAAAGAATTCAAATTTTCTGACCATCGACCTGTTTGTGCAACATTTTTGGTAGAAGTGGAAGTCATGTTTAGGGGACAAAAGAAGAAAGTTTCCACTTTCAACTTTCAAATTCATGATCTTGTACCTACAAGAACTTCTTATTATTCTTAG 1512 0.3882 MDNEFEDGQAASDMMRSNQQRKKQSFIQKVLTMRERNGRTIERGSIDSHEEISDPSIQNQGSVPSMSSCEAVQNFNVFAATWNVGGQCPSGNLDLSDFLQVRNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGPSDFSSNKGLKPTASFGGSLYFQKPSLKKIKKTFKKLNGKRLKSCNCILEMERKAAKDFCFRCQESNVNLDDSSTEEEDDSYPISVALATNQMKYSLVTCKQMVGIFVSVWMKKELIQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPKICKNQYSRMPDKILDHDRIIWFGDLNYRISLSRDVAKRLVEMKDWPALFNKDQLKMEREAGRVFKGWKEGKIYFAPTYKYAFNSDTYYAEGVKVSKNKRRTPAWCDRILWHGRGIQQLSYVRKEFKFSDHRPVCATFLVEVEVMFRGQKKKVSTFNFQIHDLVPTRTSYYS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1345 503 MobiDBLite consensus disorder prediction 12 27 - -
Mtr8g1345 503 MobiDBLite consensus disorder prediction 42 64 - -
Mtr8g1345 503 MobiDBLite consensus disorder prediction 1 27 - -
Mtr8g1345 503 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 10 68 485 - -
Mtr8g1345 503 Pfam Endonuclease/Exonuclease/phosphatase family 80 462 IPR005135 GO:0003824
Mtr8g1345 503 Gene3D Endonuclease/exonuclease/phosphatase 55 496 IPR036691 -
Mtr8g1345 503 SMART i5p_5 73 477 IPR000300 GO:0016791|GO:0046856
Mtr8g1345 503 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 68 485 IPR045849 GO:0004445|GO:0046855
Mtr8g1345 503 SUPERFAMILY DNase I-like 68 487 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1345 Mtr-Chr8 16540676 16546215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1345 246 483 Acyl Lipid Metabolism Gene Families AT2G43900 27.437 7.74e-27 113