Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1334 ATGGAGGAGGAGCATATGAGAGAGCCATTGTTGGAGAAGAAGCAATACTATGAAGATTGTCCTGGTTGCAAGGTTGAACAAGAAAATGAGCTTAATGAAGGAGTATCCATAATAAAGCTTTTGATTATATGGATGGTGGTTTTATCAGCAACTCTTCCTACATCATCTCTCTTTCCCTTCCTTTATTTCATGGTAAGGGACTTCAATGTTGCAAAAGAAGAAGCTGATATTAGTTACTATGCTGGTTATATTGGATCTTCATACATGCTTGGAAGATGTTTCACAGCTGTATTATGGGGAATGGTTTCAGATCGCTATGGTCGAAAACCTGTATTAATAATGGGGATTATCGCAGTTGTCATTTTCAACACATTATTCGGCCTTAGTACGGGTTTTTGGATGGCTATTGCCACCAGATTTCTTCTCGGAGGTTTAAATGGCGTGCTTGGACCAGTTAAGGCCTATGCTACTGAACTTTTTCGAGAAGAGCACCAAGCTATAGGACTTTCTACTGTTAGTGCAGCTTGGGGCATAGGTTTAATTGTTGGCCCAGCAATAGGAGGCTATTTGGCTCAGCCAGTTGACAAATACCCACAAATATTTCCAAAAGACTCCTTTTGGGATAAGTTCCCATACTTCTTGCCCTGCTTTACAATATCAGCACTTGCACTTACAGTAGCAATCGTCTGCATCTGGATTCCGGAAACACTTCACAATCACAATGGTAACGAAGAGTCCAAAGGTAATGCCGAAGCTTTAGAAAATGGAAGCAGCAAAGAAAAGACAGTTCAAAAGAATGAAAACCTCTTTTTGAATTGGCCTTTAATGTCATCTATCATTGCTTATTGTGTCGTCTCACTTCACGATATTGCTTACCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCTGAGGCTAGGGGGTTTGAAGTTTACAACTGATGATGTTGGTGATGTTCTTTCAATTTCAGGAGTTGCACTTTGCATCTACCAACTTTTCATATACCCATATGTGGAAAAAGCTTGTGGACCTATTGTCTTGGCCCGTATCACAGGGATTATTTCCATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTATCAGGAATAACCTTATACATTGTGATTAGTATTGCTTCCATCCTGAAAAATATTATTGCAGTGACGATTACAACCGGATTATTCCTTGTACAAAACCGAGTAGTGGAACAACACCAAAGAGGAGCAGCTAATGGAATTTCTATGACAGCTATGTCTCTATTCAAAGCTATTGGACCTGCTGCAGGTGGTACAATATTAACTTGGTCACAAAAGCGTATGGATGCTTCTTTCCTACCAGGAACTCAAATGGTGTTTTTCTTCCTTAATTTAGTTGAAGGACTTGGAATACTTTTGATGTGTAAACCATTCCTTGGTGAAAAGAAGAAAACAAACTCACACGAGTTACATTGA 1455 0.3952 MEEEHMREPLLEKKQYYEDCPGCKVEQENELNEGVSIIKLLIIWMVVLSATLPTSSLFPFLYFMVRDFNVAKEEADISYYAGYIGSSYMLGRCFTAVLWGMVSDRYGRKPVLIMGIIAVVIFNTLFGLSTGFWMAIATRFLLGGLNGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIVGPAIGGYLAQPVDKYPQIFPKDSFWDKFPYFLPCFTISALALTVAIVCIWIPETLHNHNGNEESKGNAEALENGSSKEKTVQKNENLFLNWPLMSSIIAYCVVSLHDIAYQEVFSLWAVSPLRLGGLKFTTDDVGDVLSISGVALCIYQLFIYPYVEKACGPIVLARITGIISIPLLQSYPFIAMLSGITLYIVISIASILKNIIAVTITTGLFLVQNRVVEQHQRGAANGISMTAMSLFKAIGPAAGGTILTWSQKRMDASFLPGTQMVFFFLNLVEGLGILLMCKPFLGEKKKTNSHELH* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1334 484 Pfam Major Facilitator Superfamily 43 427 IPR011701 GO:0022857|GO:0055085
Mtr8g1334 484 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 482 - -
Mtr8g1334 484 Gene3D MFS general substrate transporter like domains 38 460 IPR036259 -
Mtr8g1334 484 PRINTS Tetracycline resistance protein signature 112 136 IPR001958 GO:0022857
Mtr8g1334 484 PRINTS Tetracycline resistance protein signature 169 191 IPR001958 GO:0022857
Mtr8g1334 484 PRINTS Tetracycline resistance protein signature 340 360 IPR001958 GO:0022857
Mtr8g1334 484 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 475 IPR020846 GO:0022857
Mtr8g1334 484 CDD MFS_SLC46_TetA_like 43 469 - -
Mtr8g1334 484 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 482 - -
Mtr8g1334 484 SUPERFAMILY MFS general substrate transporter 40 472 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1334 Mtr-Chr8 16438701 16443569 Dispersed/Proximal