Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1330 ATGGAGAAAGAGCCATTGTTGGAGAAGAAGCAATACTATGAGGATTGTCCTGGTTGTAAAGTGGAACAAACTAAAGAGCTTAATCAAGGGCTATCCATGATAAATCTTGTGATTATTTGGATGATTGTTTTATCTGCTACTTTGCCTGCATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTCAACGTTGCAAAAGAAGAAGCTGATATAAGTTATTATGCTGGTTATGTTGGATCTTCGTTCATGCTTGGAAGATGTTTGACGTCTGTACTATGGGGAATGGTTTCAGATCGCTATGGTCGAAAACCTGTTATAATCATGGGAATCATTGCAGTTGTCATTTTCAACACATTATTTGGCCTTAGTACGGGTTATTGGATGGCTATTATCACGAGATTTCTTCTCGGAAGTTTAAATGGCGTGCTTGGGCCAGTTAAGGCCTATGCTTCTGAACTTTTTCGTGAAGAGCACCAAGCTATAGGACTTTCTACTGTTAGTGCAGCTTGGGGCGTAGGTTTAATTATTGGCCCGGCAATAGGAGGCTATTTGGCTCAGCCAGTAGAAAAGTACCCACAAATTTTTCCAAAGGATTCCTTTTGGGACAAGTTCCCATACTTCTTGCCCTGCTTTATAATATCAGTACTTGCATTTACAGTAGTAATTGCCTGCATCTGGATTCCGGAAACACTTCACAATCACAATGGTAACAAAGAGTCCACAGATGACGCCGAAGCTTTAGAAAATGGAAGCAACAAAGAAAAGACAGTCCGAAAGAATGAAAACCTCTTTATGAATTGGCCTTTAATGTCATCTATCATAGTTTATTGTGTCTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCATTATGGGCTACTAGTCCTCCGAAGCTAGGGGGTTTGAACTTTACAACTGATGATGTTGGTAACGTTCTTTCAATTTCAGGAGTTGCACTTTGCATCTACCAACTTTTCATATACCCTTCTGTTGAAAAAGCTTGTGGACCTATTGGCCTTGGCCGCATCACAGGGATTTTTTCTATACCACTATTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGCATAACCTTATATATAGTGATTAGTATTGCTTCTGTCCTCAAGAATATTATGTCTGTCACGATTACAACAGGTTTATTCCTAATACAAAACCGAGTAGTGGAACAACACCAAAGAGGGGCAGCTAATGGCCTTTCTATGACAGGGATGTCTCTATTCAAAGCCATTGGACCTGCTGCAGGCGGTACAATATTAACTTGGTCACAAAAGCGTATGGATGCTTCTTTCCTACCGGGCACTCAAATGGTCTTTTTTTTCCTTAATTTAGTAGAAGGACTTGGAATAATTTTGTTGTTCAAACCATTCCTTGGTGAAATGAAGAAAAGAAACTCAGATCTTTTACATTGA 1443 0.3936 MEKEPLLEKKQYYEDCPGCKVEQTKELNQGLSMINLVIIWMIVLSATLPASSLFPFLYFMVRDFNVAKEEADISYYAGYVGSSFMLGRCLTSVLWGMVSDRYGRKPVIIMGIIAVVIFNTLFGLSTGYWMAIITRFLLGSLNGVLGPVKAYASELFREEHQAIGLSTVSAAWGVGLIIGPAIGGYLAQPVEKYPQIFPKDSFWDKFPYFLPCFIISVLAFTVVIACIWIPETLHNHNGNKESTDDAEALENGSNKEKTVRKNENLFMNWPLMSSIIVYCVFSLHDIAYQEVFSLWATSPPKLGGLNFTTDDVGNVLSISGVALCIYQLFIYPSVEKACGPIGLGRITGIFSIPLLQSYPFIAMLSGITLYIVISIASVLKNIMSVTITTGLFLIQNRVVEQHQRGAANGLSMTGMSLFKAIGPAAGGTILTWSQKRMDASFLPGTQMVFFFLNLVEGLGIILLFKPFLGEMKKRNSDLLH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1330 480 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 3 478 - -
Mtr8g1330 480 Pfam Major Facilitator Superfamily 40 283 IPR011701 GO:0022857|GO:0055085
Mtr8g1330 480 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 3 478 - -
Mtr8g1330 480 CDD MFS_SLC46_TetA_like 39 465 - -
Mtr8g1330 480 ProSiteProfiles Major facilitator superfamily (MFS) profile. 35 471 IPR020846 GO:0022857
Mtr8g1330 480 PRINTS Tetracycline resistance protein signature 108 132 IPR001958 GO:0022857
Mtr8g1330 480 PRINTS Tetracycline resistance protein signature 165 187 IPR001958 GO:0022857
Mtr8g1330 480 Gene3D MFS general substrate transporter like domains 34 456 IPR036259 -
Mtr8g1330 480 SUPERFAMILY MFS general substrate transporter 35 467 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1330 Mtr-Chr8 16387230 16392312 Dispersed/Tandem