Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1318 ATGTCTCATGAATCACAAAGGGTAGTGGTGATCCACCATGCATCTATAAATTTCAGTGCTAGAGCTCTTAGATGGGCCCTCAATGGTTTTTCACTTGAGAATGGAGATAACCTTACACTTGTTGCAATTCTTCGCCAAGTAAATAGTCCTACTAGTGCTAGATTTCGTGCAATATTTGGGACTGACCAAAATATTGTTGAGGAAGAGGTTGCCAAGAAGAAAGAAAAGTTGTATAATAATGCATGCATAAGGAAAATTTCTGAGCACTGTGAAACACACAAGATTCAGTTCTTGATAGAAGTGATTCCAGGCAAAATACCAGAGCATGCTATAAATGCCGCCATCCGTTTGAATGCAACATCAGTTATAATTGATAGAGACATGAAGAAATATAAGAAGGATTTCATGCAAAGTCTCTCTTGTGCTTTGCTAGTAATGAAAAGTGATAACTCCATTAAGCACTTGAGAGGGCCAAGAAAAGAAAAGATTTCTTTCAGAAGATATGATGATGCAAGTTCAGTAAAAAGTTCTGAATCCTCGCCAAGTTTGTGGAGCATGACAAACGCTGTTTTCCGCTCCAAATCGAGCTCTAATCTAACGAAGATTGTTTGTCATCAACTTCATTGTCAAATAATACAAACACCTGAAGATAAAGATCTAGATATGGCAAGAGGCTATTGCCTATTACCAACTCCTGATAGTCAAAAGACAAGTGTTCTTGAAATGCGTCACAAAGATACAACATTTGAACATATCAGAAACCATAAAACGTATCAGATCGTTGAAAATTTTAAAAATTCTGTTTGCTCAGTGTGTGATAACAGAAGGCCAAAATTTGAATTGATGAAAGAATTCACATACGGGGAGCTGCATGAAGCAACACATGGTTTTTCTCCCAAGAACTATTTGTCAGAAGGCGGATTCGGTTCGGTTTATTGGGGAAAGATGCAAGGACTCAAGATTGCTGTTAAGAAACATAAATTTGCAAGCCTCCAAGGAGAGAAAGAATTCAAATCTGAAGTTAATGCACTCAACAAAGCAATACATGAAAATGTGGTCATGCTGCTAGGATCTTGTTCGGAGGGAAAGAACAGATTTCTTGTATATGAATTTGTTTGCAATGGCTCACTTGATCAACATTTATCGCAACACTCTAGGAAACCTCTTAATTGGGCAGCCAGGATCAAAGTGGCAATTGGGGCTGCAAAAGGCTTGTTGTATTTGCATGAGAATAACATCATACACAGAGATATGAGACCAAGTAACATCCTTGTTACACATGATTTTGAAGCAATGATTGGAGATTTTGGTCTGGCTAGGACTGAACAAATGGACTCAGTGTACTCAACAGATGTTGTTGGAACATTAGGGTATATGGCACCAGAATATGCAGAATCTGGTAAAGTGTCAACCAAGTCAGATGTGTATTCCTTTGGAGTAGTGCTTCTTCAGTTAATAACAGGAATGAGGACCACAGACAAAAGAATTGGACACAAAAGTCTTGTGGGATGGGCCAGGCCACTACTGAAGGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACCTATGATTGTCATCAGCTTTTTTGGATGATTCGTTTAGCAGAAAAATGTCTCACAAGGGATCCTCAAAAGCGATTATCAATGGATACTGTGGTTAGTGCATTAACTCATATAGTAGAAGGCAGCACATGCAGCATGGTACTAAGAGACTGCTCCCCAGCACGGTCAGATTCCTCTTATGACATGTCAGAATCCCCTGTATCAGATGTCTCTCCAGAAATAGAAGATGAAGAAGATGGAATCGTCTGTGTAGGATGTACCACAGTTAATTTACGACCCCCTCCATCTCCTCCATTAGGAAGCACTTCATGGAGTACTTCAAAACATATATGTTCACAAGGCTGA 1917 0.3912 MSHESQRVVVIHHASINFSARALRWALNGFSLENGDNLTLVAILRQVNSPTSARFRAIFGTDQNIVEEEVAKKKEKLYNNACIRKISEHCETHKIQFLIEVIPGKIPEHAINAAIRLNATSVIIDRDMKKYKKDFMQSLSCALLVMKSDNSIKHLRGPRKEKISFRRYDDASSVKSSESSPSLWSMTNAVFRSKSSSNLTKIVCHQLHCQIIQTPEDKDLDMARGYCLLPTPDSQKTSVLEMRHKDTTFEHIRNHKTYQIVENFKNSVCSVCDNRRPKFELMKEFTYGELHEATHGFSPKNYLSEGGFGSVYWGKMQGLKIAVKKHKFASLQGEKEFKSEVNALNKAIHENVVMLLGSCSEGKNRFLVYEFVCNGSLDQHLSQHSRKPLNWAARIKVAIGAAKGLLYLHENNIIHRDMRPSNILVTHDFEAMIGDFGLARTEQMDSVYSTDVVGTLGYMAPEYAESGKVSTKSDVYSFGVVLLQLITGMRTTDKRIGHKSLVGWARPLLKERNYPDLIDERMMDTYDCHQLFWMIRLAEKCLTRDPQKRLSMDTVVSALTHIVEGSTCSMVLRDCSPARSDSSYDMSESPVSDVSPEIEDEEDGIVCVGCTTVNLRPPPSPPLGSTSWSTSKHICSQG* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1318 638 ProSiteProfiles Protein kinase domain profile. 297 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1318 638 Pfam Protein tyrosine and serine/threonine kinase 301 559 IPR001245 GO:0004672|GO:0006468
Mtr8g1318 638 Gene3D Phosphorylase Kinase; domain 1 269 371 - -
Mtr8g1318 638 SUPERFAMILY Protein kinase-like (PK-like) 282 576 IPR011009 -
Mtr8g1318 638 Gene3D Transferase(Phosphotransferase) domain 1 372 574 - -
Mtr8g1318 638 ProSitePatterns Tyrosine protein kinases specific active-site signature. 413 425 IPR008266 GO:0004672|GO:0006468
Mtr8g1318 638 PANTHER OS01G0253100 PROTEIN 7 623 IPR045271 GO:0004714|GO:0006468
Mtr8g1318 638 MobiDBLite consensus disorder prediction 579 598 - -
Mtr8g1318 638 PANTHER TYROSINE KINASE FAMILY PROTEIN 7 623 - -
Mtr8g1318 638 MobiDBLite consensus disorder prediction 617 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1318 Mtr-Chr8 16238149 16242852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1318 218 573 Trihelix Transcription Factor Family AT5G38560 39.623 3.26e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mtr8g1318 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0267 3 2938141 2940871 Mtr8g1318 8 16238149 16242852 PCT