Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1307 ATGTCACAAATGAACATGACTTGTACTGCAAGGTTTCTAAGCTTCATTCTACTTCATATTTTTCTCTTCACCTTAACAAATGCACAATCACCATATTACAGGTTAAATTTTTGCCAGAATTCAACAGAAAAAACAAACAACACATCATACCGATCCAACGTTAGAAATCTTCTTCTATGGATAAACACTGATTCTGCAACAGGCTCAGTATCTAACCACATAGCCATAAACAGCAACAAAACTAACAGCAATGATAATGATGGTGATGTTGTGTATGGATTCTACGATTGTCGTGGTGACGTAACAGGAAGTTTCTGTCAATTTTGTATCAACGCTGCTGTTAGAGCGATCGCTCAATGTTGTCCCAATGGCGTCTCGGCTATGATATGGTATGACATATGTGTCATCGGTTATTCTGACCATAATACATCAGGAAAAATTTCTGTTACCCCATCATGGAATTTAACCGGAACCAAAAACACGAAGGACTCAACTGAACTTGAGAAAGCAGTAGATGACATGAGGAATTTGATAGGAAGAGTGACGGCAGAAGCTAATTCCAATTGGGCAGTGGGAGAGTTCGATTGGAGTGACACCGAGAAAAGGTATGGTTGGGTGCAGTGTAATAGTGACCTTACAAAAGACGGGTGCAGATATTGTTTGGAAACTATGTTGGATAAAGTTCCTCAATGTTGTGGAACAAAGGTAAAATGGGCAGTGGTGTCTCCTAGTTGTGGAATGGAGATTGATGATAATAAGTTCTACAACTTCCAAACAGAATCGCCTCCTTCGTTGCCAAATCCAGGCAAACAGGACGGGGCGAGTAATACCAAAACCTTGATCATCATCTTAGTAAGTGTACTGGTGGCAGTAGCTCTACTAAGTTGTTCTGTCTATTACTACCGGAGAAAAAATAGGTTAAATAAAGGTGGTTTGCTGTTAAGGACCATTACTCCTAAGTCTTTCCGTGACCATGTTCCAAGAGAGGATTCATTCAATGGAGATCTTCCTACAATCCCTTTAACTGTAATTCAACAAAGCACCGATAACTTTTCGGAGTCATTTAAATTAGGAGAAGGTGGATTTGGCCCAGTTTACAAGGGTACTTTACCAGATGGGACCGAAATTGCAGCCAAAAGGCTTTCAGAAACGTCAGGTCAAGGTTTAGAGGAGTTTAAGAATGAAGTAATTTTCATAGCGAAACTTCAACATAGAAACCTTGTGAAACTCTTAGGTTGCTGCTTTGAAGAAAATGAAAAGATACTAGTATATGAGTATATGCCAAATTCAAGCCTTAACTTTCACCTTTTCAATGAAGAAAAACATAAGCATCTAGATTGGAAACTACGACTAAGCATTATCAAAGGAATCGCAAGAGGACTTCTATACCTTCATGAGGATTCTCCACTTAGAGTAATCCACAGAGATCTGAAAGCGAGCAATGTTCTTCTGGATGATGAAATGAATCCAAAAATATCTGATTTTGGATTAGCAAGGGCATTTGAAAAAGATCAATGTCATACAAAGACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATACGCTATGGCTGGGTTATTTTCAGTGAAATCCGATGTTTTCAGCTTTGGAGTTCTTGTGTTAGAGATAATTTATGGAAAAAGAAATGGAGACTTCTTTCTTTCAGAACATATGCAAAGTCTTCTATTATATACTTGGAAACTCTGGTGTGAAGGAAAAAGTTTAGAATTAATCGATCCATTCCACAAAAAAACGTATGTTGAGAGTGAAGTCATGAAGTGTATTCACATTGGTTTATTGTGCGTACAAGAAGACGCAGCAGATAGGCCAACGATGTCCATCGTTGTTCGCATGCTAGGGAGTGACACAGTAGACCTTCCAAAACCCACACAACCAGCATATTCCATTGGCAGAAAGTCGAAGAATGAAGATCAAAGTTCAAAAAATTCTAAGGATAATTCTGTTGATGAAGAAACCCTAACTATTGTTTCACCTAGATATGAAGGGCCAAACTCCGTTATTGTCACTCCTCTTCTTACTGGTTCGAATTACTTGGCTTGGAGTAGATCCATGCAACGTGCTCTTGGCGCGAAAAACAAGCTTGTGTTCATCAATGGCGCAGTTCCAATTCCTGATCTTGAAGATTTGAATCGTGATGCATGGGAACGATGCAATCACCTTATTCACTCGAAACAATTAACAGCCTTGAAAAATTCACAACACAACATGACTTGTACTACAAGGTTTCTAAGCTTCATTCTACTTCATCACTTCCTCTTCATGACGCTAACGAATGCGCAATCACCATTTTACATGTACAGTTATTGCCAGAATTCTACTGAAAAAACAGTCAACACTTCATATCAATCCAACGTTAACAACTTTTTGTCATGGACAACATCGGATTCTGCCAAAGGAACTGTATCTAACCACAACACCATAGGTAGCAACAACAGCAATTATAATGATACGGTTTATGGGTTCTATGATTGTCTAGGTCCTAACACAAGAAGTTTCTGTCAATTTTGCATCAACACTGCTTTTAGAGAAATTGCAAAATATTGTCCCAACAGTGTCTCGGCTATTATATGGTATGATGTATGCATCATGGGTTATACTAACCAGAATCCCTCAGGAAGAGTTTTTCTAGAACCATCATGGAATGTAACCGGATCCAAAAACGTTAAGGACTCAACAGAACTTGGGAAAGCTGAGAATAGCATGACGAGTTTGATACGCAAAGTGACTACAGTAGCGAGTCTCAATTGGGCAACTGATGAGTTCAATTGGAGTGACACTGACAAAAGGTATGGCTTGGTGCAGTGTAATACCGAGCTTAGTAAGGATGGCTGCCGACAGTGTTTGGAGGCTATGTTGGAAAGAGTTCCTCAGTGTTGTGGAACAAAGGTTGGATGGGTAGTTTTGTGTCCTAGTTGTGGGTTGAAGATTGATGATTATAATTTCTACGAACAACAAACAGGATCTCCATCTCCTTTGCCAAATCCAGGCAAGCAGGAAGGGGCAAGTCATACCAAAACTTTGATCATCATCGTAGTAAGTGTGCTTGTGGCAGTAGCTCTACTAAGTTGCTATGGCTACTATTACTGGAAAAAGAAAGGATTAAGTGAAGGTGGTTTGCTGTTGAGAACCGTTACGCCGATGTCTTTCCGTGATCATGTTCAAAGAGATGATTCATTGCATGGAGACCTTCCTATAATTCCTTTAAGTGTAATTCAACAGGCCACGGATAACTTTTCAGAGTCATCTAAATTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTACTTTACCAGATGGCACAGAAGTTGCTGTGAAAAGGCTTGCAGAGATGTCTGGTCAAGGTTCAGAGGAGTTCGAAAATGAAGTAATCTTCATAGCCAATCTGCAACACCGAAACCTCGTGAAACTCTTGGGCTGCTGCATGGAGGAAAATGAAAAAATACTTGTATATGAATACTTGCAAAATTCAAGCCTCGACTTTCACCTTTTCGATAAGGAAAAGCATAAGCACATAGATTGGAGATTACGACGAAGCATTATCAATGGAATTGCAAAAGGACTGCTATACCTTCATGAGGATTCTCGACTTAGAGTAATCCACAGAGATCTGAAAGCCAGCAATGTTCTTCTAGATGATGAAATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGAGATTTGAAAAAGATCAATGCCCGACAAAAACAGAAAGAGTTTTTGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCTGGCTTATTTTCAGTGAAATCCGATGTTTTTAGCTTTGGAGTTCTTGTATTAGAAATTATTTACGGAAAAAGAAATGGCGAATTCTTTCTTTCAGAGCATATGCAAAGTCTTCTATTATATACTTGGAAACTCTGGTGTGAAGGAAAAAGTTTAGAATTAATCGATCCATTCCACCAAAAAATGTACATTGAAAGTGAAGTCTTGAAGTGTATACACATTGGTTTACTTTGTGTACAAGAAGATGCAGCAGATCGACCAACCATGTCCACCGTTGTTAGCATGCTAGGGAGTGAGACAGTAGACCTTCCAAAACCCACGCAACCAGCATTTTCAGTTGGTAGAAAACCCAAGAATGAAGATCAAAGTTCAAAAAATTATAAGGATAATTCTGTTGATGAAGAAACTATAACTATTGTTTCACCTAGATAG 4221 0.3907 MSQMNMTCTARFLSFILLHIFLFTLTNAQSPYYRLNFCQNSTEKTNNTSYRSNVRNLLLWINTDSATGSVSNHIAINSNKTNSNDNDGDVVYGFYDCRGDVTGSFCQFCINAAVRAIAQCCPNGVSAMIWYDICVIGYSDHNTSGKISVTPSWNLTGTKNTKDSTELEKAVDDMRNLIGRVTAEANSNWAVGEFDWSDTEKRYGWVQCNSDLTKDGCRYCLETMLDKVPQCCGTKVKWAVVSPSCGMEIDDNKFYNFQTESPPSLPNPGKQDGASNTKTLIIILVSVLVAVALLSCSVYYYRRKNRLNKGGLLLRTITPKSFRDHVPREDSFNGDLPTIPLTVIQQSTDNFSESFKLGEGGFGPVYKGTLPDGTEIAAKRLSETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEENEKILVYEYMPNSSLNFHLFNEEKHKHLDWKLRLSIIKGIARGLLYLHEDSPLRVIHRDLKASNVLLDDEMNPKISDFGLARAFEKDQCHTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLVLEIIYGKRNGDFFLSEHMQSLLLYTWKLWCEGKSLELIDPFHKKTYVESEVMKCIHIGLLCVQEDAADRPTMSIVVRMLGSDTVDLPKPTQPAYSIGRKSKNEDQSSKNSKDNSVDEETLTIVSPRYEGPNSVIVTPLLTGSNYLAWSRSMQRALGAKNKLVFINGAVPIPDLEDLNRDAWERCNHLIHSKQLTALKNSQHNMTCTTRFLSFILLHHFLFMTLTNAQSPFYMYSYCQNSTEKTVNTSYQSNVNNFLSWTTSDSAKGTVSNHNTIGSNNSNYNDTVYGFYDCLGPNTRSFCQFCINTAFREIAKYCPNSVSAIIWYDVCIMGYTNQNPSGRVFLEPSWNVTGSKNVKDSTELGKAENSMTSLIRKVTTVASLNWATDEFNWSDTDKRYGLVQCNTELSKDGCRQCLEAMLERVPQCCGTKVGWVVLCPSCGLKIDDYNFYEQQTGSPSPLPNPGKQEGASHTKTLIIIVVSVLVAVALLSCYGYYYWKKKGLSEGGLLLRTVTPMSFRDHVQRDDSLHGDLPIIPLSVIQQATDNFSESSKLGEGGFGPVYKGTLPDGTEVAVKRLAEMSGQGSEEFENEVIFIANLQHRNLVKLLGCCMEENEKILVYEYLQNSSLDFHLFDKEKHKHIDWRLRRSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARRFEKDQCPTKTERVFGTYGYMAPEYAMAGLFSVKSDVFSFGVLVLEIIYGKRNGEFFLSEHMQSLLLYTWKLWCEGKSLELIDPFHQKMYIESEVLKCIHIGLLCVQEDAADRPTMSTVVSMLGSETVDLPKPTQPAFSVGRKPKNEDQSSKNYKDNSVDEETITIVSPR* 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1307 1406 MobiDBLite consensus disorder prediction 644 658 - -
Mtr8g1307 1406 MobiDBLite consensus disorder prediction 1363 1406 - -
Mtr8g1307 1406 MobiDBLite consensus disorder prediction 1381 1395 - -
Mtr8g1307 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Mtr8g1307 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1209 1221 IPR008271 GO:0004672|GO:0006468
Mtr8g1307 1406 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Mtr8g1307 1406 SMART serkin_6 1088 1359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1307 1406 SMART serkin_6 351 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1307 1406 ProSiteProfiles Protein kinase domain profile. 1088 1374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1307 1406 Pfam Protein tyrosine and serine/threonine kinase 1091 1359 IPR001245 GO:0004672|GO:0006468
Mtr8g1307 1406 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672|GO:0006468
Mtr8g1307 1406 Gene3D Transferase(Phosphotransferase) domain 1 1164 1367 - -
Mtr8g1307 1406 Gene3D Transferase(Phosphotransferase) domain 1 427 630 - -
Mtr8g1307 1406 ProSiteProfiles Gnk2-homologous domain profile. 886 991 IPR002902 -
Mtr8g1307 1406 ProSiteProfiles Gnk2-homologous domain profile. 32 143 IPR002902 -
Mtr8g1307 1406 Pfam Domain of unknown function (DUF3403) 1361 1406 IPR021820 GO:0004674
Mtr8g1307 1406 Pfam gag-polypeptide of LTR copia-type 673 714 IPR029472 -
Mtr8g1307 1406 CDD STKc_IRAK 357 622 - -
Mtr8g1307 1406 SUPERFAMILY Protein kinase-like (PK-like) 334 622 IPR011009 -
Mtr8g1307 1406 SUPERFAMILY Protein kinase-like (PK-like) 1072 1376 IPR011009 -
Mtr8g1307 1406 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 667 - -
Mtr8g1307 1406 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 764 1404 - -
Mtr8g1307 1406 MobiDBLite consensus disorder prediction 629 664 - -
Mtr8g1307 1406 ProSiteProfiles Gnk2-homologous domain profile. 773 880 IPR002902 -
Mtr8g1307 1406 Gene3D Phosphorylase Kinase; domain 1 317 426 - -
Mtr8g1307 1406 Gene3D Phosphorylase Kinase; domain 1 1056 1163 - -
Mtr8g1307 1406 Gene3D - 772 879 IPR038408 -
Mtr8g1307 1406 Gene3D - 151 254 IPR038408 -
Mtr8g1307 1406 Gene3D - 889 991 IPR038408 -
Mtr8g1307 1406 Gene3D - 32 142 IPR038408 -
Mtr8g1307 1406 PANTHER PROTEIN KINASE DOMAIN 23 667 - -
Mtr8g1307 1406 PANTHER PROTEIN KINASE DOMAIN 764 1404 - -
Mtr8g1307 1406 CDD STKc_IRAK 1094 1359 - -
Mtr8g1307 1406 Pfam Salt stress response/antifungal 779 877 IPR002902 -
Mtr8g1307 1406 Pfam Salt stress response/antifungal 38 140 IPR002902 -
Mtr8g1307 1406 Pfam Salt stress response/antifungal 173 249 IPR002902 -
Mtr8g1307 1406 Pfam Salt stress response/antifungal 908 988 IPR002902 -
Mtr8g1307 1406 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1307 Mtr-Chr8 16032365 16044332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1307 14 669 Receptor kinase-like Gene Family AT4G05200 39.884 6.97e-162 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1307 PK_Tyr_Ser-Thr 4.2e-48 CL0016